chr16 : 9,370,057 9,370,636
579 bp 59 TFs 2 linked genes
This 579 bp open chromatin element is linked to HAPSTR1 and GRIN2A and is bound by 59 transcription factors.
Linked Genes
2 genes
Link type
Gene Expression Dist. to TSS Distance Link type
HAPSTR1 278.7 kb Distal Multiome
GRIN2A 810.4 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:9,365,057 – 9,375,636
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 362 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 347 bp overlap
BRD4 9 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 579 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 408 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 337 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 413 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 198 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 191 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 263 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 272 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 439 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 340 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 294 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 251 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 248 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 235 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 302 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 188 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 206 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 423 bp overlap
ESR1 5 datasets
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 122 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 293 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 265 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 309 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 151 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 325 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 166 bp overlap
EZH2 2 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 126 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 283 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 324 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 397 bp overlap
ChIP DE DE-GATA4-2 527 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 154 bp overlap
ChIP foregut GSE117136.GATA4.foregut 295 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 409 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 556 bp overlap
ChIP DE DE-GATA6-2 517 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 453 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 501 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 547 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 474 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 519 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 548 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 448 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 259 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 447 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 205 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 399 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 349 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 254 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 292 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 208 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 214 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 214 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 252 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 262 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 402 bp overlap
NFATC3 1 dataset
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 515 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 316 bp overlap
Nfat5 1 dataset
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 137 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 284 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 306 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 306 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 338 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 227 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 241 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 219 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 299 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 299 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 120 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 142 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 432 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 292 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 399 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 160 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 486 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 551 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 423 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 510 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 338 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 524 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 482 bp overlap
SOX15 1 dataset
Motif DE_36h DE_36h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 365 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 390 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 193 bp overlap
TBX5 5 datasets
ChIP G296S GSE85628.TBX5.G296S 271 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 271 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 385 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 228 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 352 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 382 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 382 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 223 bp overlap
ZNF768 1 dataset
Motif DE_36h DE_36h-ZNF768_MA1731.2 9 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 237 bp overlap