chr1 : 237,953,304 – 237,953,513
209 bp 43 TFs 0 linked genes
This 209 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:237,948,304 – 237,958,513
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 179 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 170 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 166 bp overlap
CEBPA 2 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 104 bp overlap
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 91 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 153 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 68 bp overlap
CTCF 304 datasets
ChIP 22Rv1 ENCFF466OXN 209 bp overlap
ChIP 22Rv1 ENCFF466OXN 209 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 209 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 209 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 209 bp overlap
ChIP 81-3 ERP002246.CTCF.81-3 144 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 209 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 209 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 209 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 209 bp overlap
ChIP A549 ENCFF034FVO 209 bp overlap
ChIP AG09309 ENCFF478XPS 209 bp overlap
ChIP BE2C ENCFF757SRF 171 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 209 bp overlap
ChIP C4-2B ENCFF821XVN 209 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 209 bp overlap
ChIP Caco-2 ENCFF934QYS 199 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 108 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 209 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 136 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 185 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 183 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 209 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 132 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 119 bp overlap
ChIP GM23338 ENCFF531QOI 209 bp overlap
ChIP GM23338 ENCFF772DML 169 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 209 bp overlap
ChIP H1 ENCFF414GZI 196 bp overlap
ChIP H1 ENCFF764RHO 175 bp overlap
ChIP H54 ENCFF255TVO 89 bp overlap
ChIP H9 ENCFF152GTF 209 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 209 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 209 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 209 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 209 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 209 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 209 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 197 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 209 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 209 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 209 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 183 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 138 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 118 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 179 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 164 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 209 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 153 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 207 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 209 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 209 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 174 bp overlap
ChIP HEK293 ENCFF498RMM 209 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 209 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 209 bp overlap
ChIP HFFc6 ENCFF005CJI 142 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 131 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 100 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 199 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 119 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 209 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 209 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 209 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 209 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 209 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 209 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 209 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 209 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 209 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 209 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 148 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 209 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 209 bp overlap
ChIP HeLa-S3_synchro GSE108173.CTCF.HeLa-S3_synchro 209 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 209 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 167 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 185 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 186 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 192 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 105 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 201 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 155 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 107 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 107 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 151 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 105 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 124 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 209 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 118 bp overlap
ChIP LNCAP ENCFF223HIG 209 bp overlap
ChIP LNCAP ENCFF700QXT 209 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 209 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 164 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 130 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 209 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 209 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 209 bp overlap
ChIP MCF 10A ENCFF988BGF 209 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 209 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 194 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 209 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 209 bp overlap
ChIP MCF-7 ENCFF139NQI 209 bp overlap
ChIP MCF-7 ENCFF162GNE 209 bp overlap
ChIP MCF-7 ENCFF198DQX 71 bp overlap
ChIP MCF-7 ENCFF210JUZ 209 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 71 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 209 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 209 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 209 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 207 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 177 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 155 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 184 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 150 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 203 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 209 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 209 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 209 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 209 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 184 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 168 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 109 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 209 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 209 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 131 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 162 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 209 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 209 bp overlap
ChIP NB4 ENCFF155DNY 209 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 177 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 209 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 209 bp overlap
ChIP OCI-LY1 ENCFF455ESK 209 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 186 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 209 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 209 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 209 bp overlap
ChIP PC-3 ENCFF487TUI 209 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 209 bp overlap
ChIP Panc1 ENCFF056JQX 209 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 209 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 209 bp overlap
ChIP RWPE2 ENCFF911IEE 209 bp overlap
ChIP SEM GSE117864.CTCF.SEM 153 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 166 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 169 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 188 bp overlap
ChIP SK-N-SH ENCFF575DMG 209 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 209 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 148 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 158 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 209 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 163 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 146 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 209 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 209 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 129 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 158 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 209 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 209 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 209 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 209 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 209 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 209 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.CTCF.THP-1_PMA_Dex-0h 194 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.CTCF.THP-1_PMA_Dex-6h 209 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 209 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 205 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 209 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 209 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 209 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 209 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 209 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 205 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-7h-Flavo-3h 209 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 209 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 209 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 176 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 209 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 188 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 209 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 206 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 209 bp overlap
ChIP UPCI-SCC-090 GSE143026.CTCF.UPCI-SCC-090 122 bp overlap
ChIP VCaP ENCFF858YQT 209 bp overlap
ChIP VCaP ENCFF858YQT 209 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 209 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 209 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 200 bp overlap
ChIP VU-SCC-147 GSE143026.CTCF.VU-SCC-147 117 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 128 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 209 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 209 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 209 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 209 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 209 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 184 bp overlap
ChIP body of pancreas ENCFF798MEO 209 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 209 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 209 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 209 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 209 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 209 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 152 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 140 bp overlap
ChIP endodermal cell ENCFF471YCZ 209 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 199 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 209 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 209 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 209 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 209 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 118 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 209 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 209 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 209 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 173 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 209 bp overlap
ChIP esophagus squamous epithelium ENCFF571ODZ 209 bp overlap
ChIP esophagus squamous epithelium ENCFF683HYK 209 bp overlap
ChIP esophagus squamous epithelium ENCFF797YPG 209 bp overlap
ChIP esophagus_squamous-epithelium ENCSR756URL.CTCF.esophagus_squamous-epithelium 209 bp overlap
ChIP esophagus_squamous-epithelium ENCSR003SZZ.CTCF.esophagus_squamous-epithelium 209 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 209 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 209 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 209 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 209 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 176 bp overlap
ChIP hESC GSE20650.CTCF.hESC 163 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 209 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 209 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 207 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 209 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 209 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 209 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 209 bp overlap
ChIP hepatocyte ENCFF263BLJ 209 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 209 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 205 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 209 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 198 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 159 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 209 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 200 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 209 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 134 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 208 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 209 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 199 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 209 bp overlap
ChIP islet ERP004003.CTCF.islet 209 bp overlap
ChIP keratinocyte ENCFF046PBT 168 bp overlap
ChIP keratinocyte ENCFF291YDC 165 bp overlap
ChIP keratinocyte ENCFF667ULX 105 bp overlap
ChIP keratinocyte ENCFF805QIE 209 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 209 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 209 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 209 bp overlap
ChIP keratinocyte_mut2 GSE123711.CTCF.keratinocyte_mut2 174 bp overlap
ChIP kidney ENCFF335EKK 185 bp overlap
ChIP kidney ENCSR000DMC.CTCF.kidney 132 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 209 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 209 bp overlap
ChIP liver ENCFF895ERR 209 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 205 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 194 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 195 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 209 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 110 bp overlap
ChIP neural progenitor cell ENCFF420RBO 209 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 209 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 209 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 209 bp overlap
ChIP pancreas ENCFF315CUI 209 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 162 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 190 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 209 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 209 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 209 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 209 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 198 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 209 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 209 bp overlap
ChIP prostate ENCSR946MNG.CTCF.prostate 202 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 209 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 209 bp overlap
ChIP right lobe of liver ENCFF011NDG 209 bp overlap
ChIP right lobe of liver ENCFF250KSY 209 bp overlap
ChIP right lobe of liver ENCFF523SCB 197 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 209 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 209 bp overlap
ChIP BLaER1 ENCFF262VBH 176 bp overlap
ChIP BLaER1 ENCFF798NMV 141 bp overlap
ChIP BLaER1 ENCFF844FIP 76 bp overlap
E2F1 2 datasets
ChIP LNCaP_shCON GSE94958.E2F1.LNCaP_shCON 166 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 112 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 166 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 209 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 146 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 204 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 209 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 200 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 200 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 203 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 208 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 192 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 192 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 195 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 196 bp overlap
FOXA1 1 dataset
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 80 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 170 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 149 bp overlap
ChIP liver ENCFF449HPV 198 bp overlap
ChIP liver ERP002306.HNF4A.liver 150 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 209 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 188 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 209 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 171 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 176 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 209 bp overlap
RAD21 61 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 169 bp overlap
ChIP A549 ENCFF047SFC 209 bp overlap
ChIP GM12878 ENCFF046CBW 192 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 145 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 209 bp overlap
ChIP H1 ENCFF698EWO 152 bp overlap
ChIP H1 ENCFF967OJF 106 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 209 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 209 bp overlap
ChIP HEC-1-B GSE139679.RAD21.HEC-1-B 124 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 125 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 151 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 209 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 209 bp overlap
ChIP HeLa-S3 ENCFF775CHI 180 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 150 bp overlap
ChIP Ishikawa ENCFF570JVV 194 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 196 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 209 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 189 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 208 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 163 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 153 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 181 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 52 bp overlap
ChIP SK-N-SH ENCFF747MAS 209 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 190 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 209 bp overlap
ChIP T-47D GSE111923.RAD21.T-47D 209 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.RAD21.T-47D_NaCl-isotonic-triptolide 209 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 209 bp overlap
ChIP THP-1 GSE55407.RAD21.THP-1 147 bp overlap
ChIP THP-1_NS1-IFNb GSE103477.RAD21.THP-1_NS1-IFNb 162 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.RAD21.THP-1_PMA_Dex-0h 188 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.RAD21.THP-1_PMA_Dex-6h 167 bp overlap
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 209 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 208 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 209 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 207 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 197 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 192 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 209 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 204 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 209 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 206 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.RAD21.THP-1_siCtrl-eGFP-Pam3csk-0h 209 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 209 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 209 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 193 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 183 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 155 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 167 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 187 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 209 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 158 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 203 bp overlap
ChIP liver ENCFF485PAC 209 bp overlap
ChIP liver ENCFF522JHE 209 bp overlap
RARA 1 dataset
ChIP U-937_ATRA-treated_RAR GSE98006.RARA.U-937_ATRA-treated_RAR 170 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 143 bp overlap
REST 5 datasets
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 99 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 112 bp overlap
ChIP PFSK-1 ENCFF845VHA 209 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 147 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 174 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 209 bp overlap
ChIP liver ENCFF807CIA 209 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 128 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 142 bp overlap
SMC1 4 datasets
ChIP DKO GSE131606.SMC1.DKO 176 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 187 bp overlap
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 209 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 209 bp overlap
SMC1A 3 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 191 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 209 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 209 bp overlap
SMC3 10 datasets
ChIP GP5D GSE51234.SMC3.GP5D 196 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 209 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 209 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 209 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 209 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 209 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 209 bp overlap
ChIP HeLa-S3 ENCFF992MML 209 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 123 bp overlap
ChIP HeLa_ESCO2-deltaPBMA_ctrl_siRNA GSE105004.SMC3.HeLa_ESCO2-deltaPBMA_ctrl_siRNA 172 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 209 bp overlap
STAG1 8 datasets
ChIP HMEC-1 GSE101921.STAG1.HMEC-1 209 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 209 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 209 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 146 bp overlap
ChIP MCF-10A GSE101921.STAG1.MCF-10A 209 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 209 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 195 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 99 bp overlap
STAG2 5 datasets
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 209 bp overlap
ChIP MCF-10A GSE101921.STAG2.MCF-10A 209 bp overlap
ChIP MCF-10A_Control GSE101921.STAG2.MCF-10A_Control 157 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 179 bp overlap
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 188 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 146 bp overlap
Six3 1 dataset
Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 209 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 111 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 93 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 176 bp overlap
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