chr15 : 49,372,459 – 49,372,656

197 bp 47 TFs 1 linked gene

This 197 bp open chromatin element is linked to ENSG00000259531 and is bound by 47 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000259531		5.8 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

47 transcription factors

ATF3 1 dataset

ChIP K-562 ENCSR028UIU.ATF3.K-562 197 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 197 bp overlap

ERG 3 datasets

ChIP Jurkat GSE49091.ERG.Jurkat 197 bp overlap

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 141 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 148 bp overlap

ESR2 1 dataset

Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap

GATA1 3 datasets

ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap

ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap

GATA3 1 dataset

ChIP Kelly GSE65664.GATA3.Kelly 130 bp overlap

GATA4 3 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 111 bp overlap

ChIP DE DE-GATA4-2 52 bp overlap

ChIP foregut GSE117136.GATA4.foregut 187 bp overlap

GATA6 3 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 156 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 197 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 197 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 197 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 126 bp overlap

HSF1 1 dataset

ChIP MO91_27A_100UM GSE45852.HSF1.MO91_27A_100UM 141 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap

MYB 1 dataset

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

NANOG 2 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 152 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NR2C1 1 dataset

Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

NR2F2 1 dataset

Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap

NR2F6 1 dataset

ChIP K-562 ENCSR707QWA.NR2F6.K-562 70 bp overlap

NR4A1 1 dataset

Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap

Nfatc2 1 dataset

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

Nr1H2 1 dataset

Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 167 bp overlap

POU2F1 4 datasets

ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 197 bp overlap

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 197 bp overlap

ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 184 bp overlap

ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 128 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 197 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 190 bp overlap

POU3F1 1 dataset

ChIP SKM-1_D2 GSE93706.POU3F1.SKM-1_D2 197 bp overlap

POU3F2 2 datasets

ChIP hiPSC GSE149017.POU3F2.hiPSC 159 bp overlap

ChIP hiPSC_SGC0946 GSE149017.POU3F2.hiPSC_SGC0946 197 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 197 bp overlap

POU5F1 7 datasets

ChIP H1 ENCFF698ZAP 185 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 184 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 164 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 197 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 197 bp overlap

ChIP hiPSC GSE149017.POU5F1.hiPSC 197 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 196 bp overlap

Ppara 1 dataset

Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap

Pparg::Rxra 1 dataset

Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap

RXRA::VDR 1 dataset

Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap

RXRG 1 dataset

Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap

SMARCA4 3 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 197 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 197 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 197 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 197 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 197 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 141 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 98 bp overlap

ZFP91 1 dataset

ChIP K-562 ENCSR898XMH.ZFP91.K-562 144 bp overlap

ZNF257 1 dataset

ChIP HEK293T GSE78099.ZNF257.HEK293T 127 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap