chr13 : 79,288,447 79,288,694
247 bp 58 TFs 0 linked genes
This 247 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:79,283,447 – 79,293,694
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 247 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 241 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 73 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 242 bp overlap
BCL6B 1 dataset
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF128BID 247 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 222 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 247 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 153 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 145 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 247 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 160 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 119 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 160 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 111 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 247 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 230 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
GATA4 2 datasets
ChIP foregut GSE117136.GATA4.foregut 247 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 151 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 99 bp overlap
ChIP DE DE-GATA6-2 198 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 193 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 199 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 197 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 158 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 226 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 213 bp overlap
ChIP foregut GSE117136.GATA6.foregut 247 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 225 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 183 bp overlap
HNF1A 2 datasets
Motif ES_0h ES_0h-HNF1A_MA0046.3 13 bp overlap
Motif ES_0h ES_0h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif ES_0h ES_0h-HNF1B_MA0153.2 13 bp overlap
Motif ES_0h ES_0h-HNF1B_MA0153.2 13 bp overlap
HOXC13 1 dataset
Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap
Hmga1 1 dataset
Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap
Isl1 1 dataset
Motif ES_0h ES_0h-Isl1_MA1608.2 7 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 243 bp overlap
ChIP H1 ENCFF468JZD 208 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 208 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 173 bp overlap
MAX 2 datasets
ChIP WTC11 ENCFF223QFY 164 bp overlap
ChIP WTC11 ENCFF223QFY 247 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 247 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 160 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 247 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 247 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 198 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 247 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 246 bp overlap
NKX6-3 1 dataset
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NR1I3 1 dataset
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 66 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 247 bp overlap
POU4F1 1 dataset
Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 232 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 247 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 210 bp overlap
ChIP H1 ENCFF967OJF 225 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 150 bp overlap
Rarb 1 dataset
Motif ES_0h ES_0h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
SIX5 1 dataset
ChIP H1 ENCFF942SOJ 168 bp overlap
SMARCA4 6 datasets
ChIP NGP GSE134626.SMARCA4.NGP 151 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 177 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 247 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 247 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 98 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 227 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 187 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 224 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 4 datasets
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 235 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 211 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 247 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 236 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 138 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 55 bp overlap
STAT3 1 dataset
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 247 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 213 bp overlap
TEAD4 6 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 247 bp overlap
ChIP H1 ENCFF778PAX 213 bp overlap
ChIP Ishikawa ENCFF772OTG 247 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 158 bp overlap
ChIP WTC11 ENCFF114TZS 247 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 247 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 247 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 220 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
Zfp961 1 dataset
Motif ES_0h ES_0h-Zfp961_MA2126.1 8 bp overlap