chr11 : 83,443,851 – 83,444,454
603 bp 56 TFs 8 linked genes
This 603 bp open chromatin element is linked to 8 target genes and is bound by 56 transcription factors.
Linked Genes
8 genes
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CCDC90B-AS1 157.9 kb Distal Multiome+HiCAR
CCDC90B 158.1 kb Distal Multiome+HiCAR
DLG2-AS2 201.7 kb Distal Multiome
ANKRD42 250.4 kb Distal Multiome
ANKRD42-DT 250.4 kb Distal Multiome
PCF11-AS1 257.0 kb Distal Multiome
PCF11 263.6 kb Distal Multiome
DLG2 2184.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:83,438,851 – 83,449,454
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
Elf5 2 datasets
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 469 bp overlap
ChIP DE DE-FOXA2-2 509 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 548 bp overlap
ChIP DE DE-GATA4-2 603 bp overlap
Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
GATA5 7 datasets
Motif DE_24h DE_24h-GATA5_MA0766.3 8 bp overlap
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 517 bp overlap
ChIP DE DE-GATA6-2 603 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 603 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 527 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 524 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 481 bp overlap
GFI1 3 datasets
Motif DE_36h DE_36h-GFI1_MA0038.3 11 bp overlap
Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
HIC2 4 datasets
Motif DE_24h DE_24h-HIC2_MA0738.2 6 bp overlap
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
Motif DE_48h DE_48h-HIC2_MA0738.2 6 bp overlap
Motif DE_60h DE_60h-HIC2_MA0738.2 6 bp overlap
Hnf1A 4 datasets
Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_48h DE_48h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 2 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 282 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 312 bp overlap
KLF16 1 dataset
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
MEIS1 4 datasets
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MSC 4 datasets
Motif DE_24h DE_24h-MSC_MA0665.1 10 bp overlap
Motif DE_36h DE_36h-MSC_MA0665.1 10 bp overlap
Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
ONECUT1 4 datasets
Motif DE_24h DE_24h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_36h DE_36h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_48h DE_48h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap
ONECUT2 4 datasets
Motif DE_24h DE_24h-ONECUT2_MA0756.3 8 bp overlap
Motif DE_36h DE_36h-ONECUT2_MA0756.3 8 bp overlap
Motif DE_48h DE_48h-ONECUT2_MA0756.3 8 bp overlap
Motif DE_60h DE_60h-ONECUT2_MA0756.3 8 bp overlap
OSR2 5 datasets
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PBX3 5 datasets
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 194 bp overlap
PKNOX1 5 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
POU1F1 7 datasets
Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU2F1 7 datasets
Motif DE_24h DE_24h-POU2F1_MA0785.2 9 bp overlap
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
POU2F2 7 datasets
Motif DE_24h DE_24h-POU2F2_MA0507.3 13 bp overlap
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU3F1 7 datasets
Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
Motif DE_48h DE_48h-POU3F1_MA0786.2 10 bp overlap
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
POU3F2 7 datasets
Motif DE_24h DE_24h-POU3F2_MA0787.1 12 bp overlap
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
Motif DE_48h DE_48h-POU3F2_MA0787.1 12 bp overlap
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
POU3F3 7 datasets
Motif DE_24h DE_24h-POU3F3_MA0788.1 13 bp overlap
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
POU3F4 7 datasets
Motif DE_24h DE_24h-POU3F4_MA0789.1 9 bp overlap
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
POU5F1B 7 datasets
Motif DE_24h DE_24h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap
Prdm15 1 dataset
Motif DE_36h DE_36h-Prdm15_MA1616.2 11 bp overlap
Prdm5 2 datasets
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
RARA 4 datasets
Motif DE_24h DE_24h-RARA_MA0730.1 17 bp overlap
Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap
Motif DE_48h DE_48h-RARA_MA0730.1 17 bp overlap
Motif DE_60h DE_60h-RARA_MA0730.1 17 bp overlap
RARA::RXRA 4 datasets
Motif DE_24h DE_24h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_36h DE_36h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_48h DE_48h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_60h DE_60h-RARARXRA_MA0159.1 17 bp overlap
RFX7 3 datasets
Motif DE_36h DE_36h-RFX7_MA1554.2 8 bp overlap
Motif DE_48h DE_48h-RFX7_MA1554.2 8 bp overlap
Motif DE_60h DE_60h-RFX7_MA1554.2 8 bp overlap
Rfx6 3 datasets
Motif DE_36h DE_36h-Rfx6_MA1724.2 9 bp overlap
Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap
Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap
SCRT1 4 datasets
Motif DE_24h DE_24h-SCRT1_MA0743.3 10 bp overlap
Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 495 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 576 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 535 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 565 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 547 bp overlap
SMAD3 7 datasets
Motif DE_24h DE_24h-SMAD3_MA0795.1 10 bp overlap
Motif DE_36h DE_36h-SMAD3_MA0795.1 10 bp overlap
Motif DE_36h DE_36h-SMAD3_MA0795.1 10 bp overlap
Motif DE_48h DE_48h-SMAD3_MA0795.1 10 bp overlap
Motif DE_48h DE_48h-SMAD3_MA0795.1 10 bp overlap
Motif DE_60h DE_60h-SMAD3_MA0795.1 10 bp overlap
Motif DE_60h DE_60h-SMAD3_MA0795.1 10 bp overlap
SMAD5 7 datasets
Motif DE_24h DE_24h-SMAD5_MA1557.1 10 bp overlap
Motif DE_36h DE_36h-SMAD5_MA1557.1 10 bp overlap
Motif DE_36h DE_36h-SMAD5_MA1557.1 10 bp overlap
Motif DE_48h DE_48h-SMAD5_MA1557.1 10 bp overlap
Motif DE_48h DE_48h-SMAD5_MA1557.1 10 bp overlap
Motif DE_60h DE_60h-SMAD5_MA1557.1 10 bp overlap
Motif DE_60h DE_60h-SMAD5_MA1557.1 10 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 384 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 460 bp overlap
SOX9 4 datasets
Motif DE_24h DE_24h-SOX9_MA0077.2 8 bp overlap
Motif DE_36h DE_36h-SOX9_MA0077.2 8 bp overlap
Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap
Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap
SP3 1 dataset
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
Smad4 7 datasets
Motif DE_24h DE_24h-Smad4_MA1153.2 7 bp overlap
Motif DE_36h DE_36h-Smad4_MA1153.2 7 bp overlap
Motif DE_36h DE_36h-Smad4_MA1153.2 7 bp overlap
Motif DE_48h DE_48h-Smad4_MA1153.2 7 bp overlap
Motif DE_48h DE_48h-Smad4_MA1153.2 7 bp overlap
Motif DE_60h DE_60h-Smad4_MA1153.2 7 bp overlap
Motif DE_60h DE_60h-Smad4_MA1153.2 7 bp overlap
Sox17 4 datasets
Motif DE_24h DE_24h-Sox17_MA0078.3 10 bp overlap
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap
Sox7 4 datasets
Motif DE_24h DE_24h-Sox7_MA2095.1 10 bp overlap
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
TBX1 4 datasets
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 4 datasets
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 5 datasets
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 4 datasets
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX21 4 datasets
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 4 datasets
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 4 datasets
Motif DE_24h DE_24h-TBX4_MA0806.1 8 bp overlap
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 4 datasets
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TGIF1 1 dataset
Motif DE_36h DE_36h-TGIF1_MA0796.1 12 bp overlap
ZNF343 1 dataset
Motif DE_36h DE_36h-ZNF343_MA1711.2 16 bp overlap
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