chr1 : 201,636,038 201,636,480
442 bp 52 TFs 0 linked genes
This 442 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:201,631,038 – 201,641,480
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 82 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 129 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 225 bp overlap
BRD4 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 221 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 193 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 245 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 305 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 161 bp overlap
CTCF 8 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 257 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 179 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 312 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 109 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP endodermal cell ENCFF471YCZ 397 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 134 bp overlap
CTCFL 2 datasets
ChIP K-562 ENCSR000BNK.CTCFL.K-562 102 bp overlap
ChIP K562 ENCFF883NXC 171 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 304 bp overlap
ChIP BLaER1 ENCFF335XTP 251 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 58 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 67 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 85 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 98 bp overlap
ChIP neural progenitor cell ENCFF018MKA 442 bp overlap
FLI1 8 datasets
ChIP A-673 GSE99959.FLI1.A-673 258 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 290 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 242 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 268 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 299 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 331 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 164 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 78 bp overlap
FOXL2 3 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 186 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 170 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 166 bp overlap
GATA2 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 108 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 416 bp overlap
ChIP DE DE-GATA4-2 373 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 414 bp overlap
ChIP DE DE-GATA6-2 361 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 442 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 442 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 128 bp overlap
HMGB2 2 datasets
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 442 bp overlap
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 432 bp overlap
ID3 2 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 442 bp overlap
ChIP K562 ENCFF170RNI 74 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 222 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 314 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 192 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 72 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 386 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 183 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 232 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 209 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 205 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 406 bp overlap
NFIB 4 datasets
ChIP MCF-7 ENCFF799WGQ 407 bp overlap
ChIP MCF-7 ENCFF925CGH 263 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 395 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 360 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 442 bp overlap
ChIP K562 ENCFF167YID 393 bp overlap
NFIX 2 datasets
ChIP K-562 ENCSR574VJG.NFIX.K-562 198 bp overlap
ChIP K562 ENCFF382SJS 291 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 182 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 231 bp overlap
RELA 6 datasets
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 187 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 111 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 52 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 124 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 89 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 181 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 126 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 393 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 173 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 374 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 164 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 139 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 365 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 130 bp overlap
SMARCB1 3 datasets
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 232 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 392 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 335 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 132 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 214 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 442 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 399 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 222 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 362 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 99 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 315 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 202 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-DMSO GSE128673.TP53.Calu-1_MUT8-DMSO 194 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 146 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap