Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

39 transcription factors

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 182 bp overlap

BRD4 1 dataset

ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 320 bp overlap

EP300 2 datasets

ChIP SK-N-SH ENCFF829RWA 135 bp overlap

ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 143 bp overlap

GATA2 1 dataset

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 240 bp overlap

GATA3 9 datasets

ChIP BE2C GSE65664.GATA3.BE2C 81 bp overlap

ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 95 bp overlap

ChIP Jurkat GSE120063.GATA3.Jurkat 50 bp overlap

ChIP Kelly GSE94822.GATA3.Kelly 103 bp overlap

ChIP Kelly GSE65664.GATA3.Kelly 66 bp overlap

ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 237 bp overlap

ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 118 bp overlap

ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 104 bp overlap

ChIP T47D-A1-2_EtOH GSE112491.GATA3.T47D-A1-2_EtOH 55 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 86 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 263 bp overlap

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 234 bp overlap

ISL1 2 datasets

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 320 bp overlap

ChIP SK-N-SH ENCFF285GEQ 80 bp overlap

KDM1A 2 datasets

ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 177 bp overlap

ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 226 bp overlap

MAML3 2 datasets

ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 73 bp overlap

ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 70 bp overlap

MAX 1 dataset

ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 156 bp overlap

MITF 1 dataset

Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

MYC 3 datasets

ChIP MDA-MB-453_DHT GSE45201.MYC.MDA-MB-453_DHT 155 bp overlap

ChIP NB69 GSE138295.MYC.NB69 133 bp overlap

ChIP SK-N-AS GSE138295.MYC.SK-N-AS 320 bp overlap

MYCN 10 datasets

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 235 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 200 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 111 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 257 bp overlap

ChIP NB-1643 GSE94782.MYCN.NB-1643 185 bp overlap

ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 301 bp overlap

ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 159 bp overlap

ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 310 bp overlap

ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 159 bp overlap

ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 195 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 160 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 183 bp overlap

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 105 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 320 bp overlap

PKNOX1 2 datasets

ChIP HEK293T ENCFF174WDB 163 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 281 bp overlap

POLR2A 1 dataset

ChIP SK-N-MC ENCFF088IVG 115 bp overlap

POU2F1 1 dataset

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 92 bp overlap

POU6F1 1 dataset

ChIP SK-N-SH ENCFF834EMP 139 bp overlap

RAD21 1 dataset

ChIP HAP1 GSE152721.RAD21.HAP1 180 bp overlap

RARB 2 datasets

ChIP SK-N-SH ENCFF475WOR 279 bp overlap

ChIP SK-N-SH ENCFF475WOR 77 bp overlap

RCOR1 1 dataset

ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 101 bp overlap

SMARCA4 4 datasets

ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 305 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 320 bp overlap

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 279 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 220 bp overlap

SMARCB1 1 dataset

ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCB1.TTC-1240_SMARCB1-FL 129 bp overlap

SMARCC1 4 datasets

ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 171 bp overlap

ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 320 bp overlap

ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 199 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 227 bp overlap

TBX2 2 datasets

ChIP Kelly GSE94822.TBX2.Kelly 96 bp overlap

ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 237 bp overlap

TEAD4 2 datasets

ChIP BE2C GSE84389.TEAD4.BE2C 293 bp overlap

ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 293 bp overlap

TOX 1 dataset

ChIP SK-N-SH ENCFF977TQV 89 bp overlap

TWIST1 5 datasets

ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 320 bp overlap

ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 151 bp overlap

ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 265 bp overlap

ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 320 bp overlap

ChIP SHEP-21N_DOX_24H GSE80151.TWIST1.SHEP-21N_DOX_24H 320 bp overlap

UBN1 1 dataset

ChIP HeLa GSE45024.UBN1.HeLa 315 bp overlap

USF1 1 dataset

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

Vdr 1 dataset

Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap

ZC3H10 1 dataset

ChIP SK-N-SH ENCFF465WAR 78 bp overlap

ZNF274 1 dataset

Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap

ZNF780A 1 dataset

ChIP HEK293T GSE78099.ZNF780A.HEK293T 195 bp overlap

ZSCAN21 1 dataset

Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap

Genome Browser