chr10 : 97,089,264 97,089,736
472 bp 49 TFs 2 linked genes
This 472 bp open chromatin element is linked to ARHGAP19 and LCOR and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ARHGAP19 203.1 kb Distal Multiome
LCOR 257.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:97,084,264 – 97,094,736
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 188 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 156 bp overlap
BRD4 3 datasets
ChIP SW480 GSE110473.BRD4.SW480 191 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 288 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 229 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 282 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 131 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 366 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 372 bp overlap
ChIP neural cell ENCFF442QNK 461 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 136 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 172 bp overlap
ESR1 5 datasets
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 353 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 376 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 364 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 266 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 285 bp overlap
EZH2 8 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 472 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 163 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 472 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 394 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 362 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 207 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 369 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 52 bp overlap
FOS 3 datasets
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 187 bp overlap
ChIP MCF-7 ENCFF282FWZ 384 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 254 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 331 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 316 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 276 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 472 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 440 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 442 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 472 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 447 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 432 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 472 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 472 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 472 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 250 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 222 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 206 bp overlap
MYC 1 dataset
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 75 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 118 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 207 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 386 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 317 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 113 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 193 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 457 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 323 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 119 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 118 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 243 bp overlap
REST 4 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 147 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 288 bp overlap
ChIP neural ENCSR000BTV.REST.neural 418 bp overlap
ChIP neural cell ENCFF882LXX 426 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 176 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 117 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 152 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 153 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 472 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 472 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 472 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 472 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 430 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 472 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 472 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 472 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 431 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 259 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 154 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 195 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 187 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 256 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 426 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 203 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 192 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 362 bp overlap
ChIP fibroblast_L169A GSE139053.SS18-SSX.fibroblast_L169A 265 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 435 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 117 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 229 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 226 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 240 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 162 bp overlap
TP63 4 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 266 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 52 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 204 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 305 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 219 bp overlap