Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

BRD3 1 dataset

ChIP H-1_DE GSE126661.BRD3.H-1_DE 173 bp overlap

BRD4 4 datasets

ChIP MCF-10A ERP003925.BRD4.MCF-10A 135 bp overlap

ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 232 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 582 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 347 bp overlap

CTCF 2 datasets

ChIP cardiac muscle cell ENCFF777TNC 118 bp overlap

ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 103 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 398 bp overlap

EP300 2 datasets

ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 195 bp overlap

ChIP neural cell ENCFF442QNK 151 bp overlap

ESR1 10 datasets

ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 155 bp overlap

ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 350 bp overlap

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 785 bp overlap

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 204 bp overlap

ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 734 bp overlap

ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 754 bp overlap

ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 420 bp overlap

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 442 bp overlap

ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 357 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 232 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 360 bp overlap

ETV2 1 dataset

ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 160 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 268 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 567 bp overlap

ChIP DE DE-GATA4-2 743 bp overlap

GATA6 12 datasets

ChIP DE DE-GATA6-1 481 bp overlap

ChIP DE DE-GATA6-2 638 bp overlap

ChIP DE DE-GATA6-2 88 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 624 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 604 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 785 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 538 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 72 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 765 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 785 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 608 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 538 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 236 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 475 bp overlap

JUN 6 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 515 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 292 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 585 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 606 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 579 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 584 bp overlap

KMT2B 1 dataset

ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 362 bp overlap

MED1 2 datasets

ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 651 bp overlap

ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 672 bp overlap

MYB 1 dataset

ChIP THP-1 GSE90769.MYB.THP-1 207 bp overlap

MYC 1 dataset

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 58 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 286 bp overlap

NELFE 1 dataset

ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap

NFIC 1 dataset

ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 238 bp overlap

NR3C1 1 dataset

ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 195 bp overlap

NRF1 2 datasets

ChIP K-562 ENCSR998AJK.NRF1.K-562 56 bp overlap

ChIP K562 ENCFF689EWI 148 bp overlap

PAX3-FOXO1 1 dataset

ChIP Hs-352-Sk GSE83725.PAX3-FOXO1.Hs-352-Sk 72 bp overlap

POU2F2 1 dataset

ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 143 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 438 bp overlap

RAD21 1 dataset

ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 62 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 637 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 559 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 589 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 651 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 536 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 131 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 785 bp overlap

SMAD3 3 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 162 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 322 bp overlap

ChIP endoderm GSE29422.SMAD3.endoderm 178 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 366 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 467 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 731 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 785 bp overlap

SS18 2 datasets

ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 383 bp overlap

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 221 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 294 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 326 bp overlap

TBL1X 1 dataset

ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap

TCF12 1 dataset

ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 241 bp overlap

TEAD4 1 dataset

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 214 bp overlap

THAP1 1 dataset

ChIP K-562 ENCSR000BNN.THAP1.K-562 123 bp overlap

TP63 1 dataset

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 265 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 160 bp overlap

ZNF319 2 datasets

ChIP K-562 ENCSR231PDA.ZNF319.K-562 153 bp overlap

ChIP K562 ENCFF561ZSB 152 bp overlap

ZNF596 1 dataset

ChIP HEK293 ENCFF854MGB 121 bp overlap

ZNF865 1 dataset

ChIP HepG2 ENCFF472KAQ 90 bp overlap

ZSCAN4 2 datasets

ChIP HEK293 ENCFF381BKT 82 bp overlap

ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 160 bp overlap

Gene	Dist. to TSS	Distance	Link type
COL13A1	75.3 kb	Distal	Multiome
MACROH2A2	175.6 kb	Distal	Multiome
FAM241B	247.0 kb	Distal	Multiome
AIFM2	255.6 kb	Distal	Multiome
SAR1A	293.3 kb	Distal	Multiome

Genome Browser