chr10 : 15,478,046 – 15,478,763

717 bp 70 TFs 0 linked genes

This 717 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

70 transcription factors

ARNTL 1 dataset

ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 336 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD3 1 dataset

ChIP HEK293T GSE39579.BRD3.HEK293T 161 bp overlap

CREBBP 1 dataset

ChIP MCF-7 ERP000901.CREBBP.MCF-7 80 bp overlap

CTCFL 1 dataset

ChIP Kelly_resistant_JQ1 GSE103030.CTCFL.Kelly_resistant_JQ1 134 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 77 bp overlap

Cebpa 3 datasets

ChIP BLaER1 ENCFF274GAT 222 bp overlap

ChIP BLaER1 ENCFF335XTP 262 bp overlap

ChIP BLaER1 ENCFF364PUR 123 bp overlap

EOMES 2 datasets

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 546 bp overlap

EZH2 1 dataset

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 258 bp overlap

EZH2_phosphoT487 1 dataset

ChIP HCT-116 ENCSR429CLV.EZH2_phosphoT487.HCT-116 172 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 482 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 495 bp overlap

ChIP DE DE-GATA4-2 717 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 500 bp overlap

ChIP DE DE-GATA6-2 592 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 505 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 589 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 715 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 634 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 717 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 715 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 467 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 272 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 263 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 320 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 523 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000BNR.HDAC2.WA01 116 bp overlap

IKZF1 1 dataset

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 606 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 259 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 396 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 615 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 529 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 521 bp overlap

KLF5 1 dataset

ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 297 bp overlap

L3MBTL2 1 dataset

ChIP HEK293T ENCFF482NJV 541 bp overlap

MGA::EVX1 1 dataset

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

MTF2 1 dataset

ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 372 bp overlap

NANOG 3 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 474 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 336 bp overlap

ChIP hESC GSE18292.NANOG.hESC 161 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 187 bp overlap

NR1D1 1 dataset

Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nr2F6 1 dataset

Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PAX3-FOXO1 1 dataset

ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 187 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 576 bp overlap

POU5F1 2 datasets

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 390 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 256 bp overlap

PRDM4 2 datasets

ChIP HEK293 ENCFF069PHD 97 bp overlap

ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 256 bp overlap

PSIP1 2 datasets

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 220 bp overlap

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 175 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 459 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 401 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 524 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 693 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 669 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 503 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 621 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 636 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 541 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 348 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 220 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 149 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 322 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 301 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 268 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 176 bp overlap

SMARCC1 3 datasets

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 452 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 280 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 217 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 306 bp overlap

SOX2 1 dataset

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 271 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 461 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 1 dataset

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Thap11 1 dataset

Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 177 bp overlap

YY1 2 datasets

ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 282 bp overlap

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 376 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 331 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 68 bp overlap

ZNF18 1 dataset

ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 296 bp overlap

ZNF281 1 dataset

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ZNF423 3 datasets

ChIP HEK293 ENCFF937QHI 299 bp overlap

ChIP HEK293 ENCSR477OJI.ZNF423.HEK293 242 bp overlap

ChIP WTC11 ENCFF574PBR 150 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 211 bp overlap

ZNF534 1 dataset

ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap

ZSCAN5C 2 datasets

ChIP HEK293 ENCFF343DTU 179 bp overlap

ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 316 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap