chr9:37,751,142–37,751,941

chr9 : 37,751,142 – 37,751,941

799 bp 38 TFs 8 linked genes

This 799 bp open chromatin element is linked to 8 target genes and is bound by 38 transcription factors.

Linked Genes

8 genes

Gene	Expression	Dist. to TSS	Distance	Link type
TRMT10B		1.9 kb	Proximal	Proximity
EXOSC3		33.5 kb	Distal	Multiome
DCAF10		49.3 kb	Distal	Multiome
SLC25A51		152.8 kb	Distal	Multiome
TOMM5		158.9 kb	Distal	Multiome
FBXO10		175.2 kb	Distal	Multiome
POLR1E		265.6 kb	Distal	Multiome
ZBTB5		286.1 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

38 transcription factors

ChIP ME-1 GSE46044.CBFB.ME-1 224 bp overlap

ChIP ProEs GSE59087.EED.ProEs 172 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 175 bp overlap

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 198 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap

FEZF2 1 dataset

Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap

FOXA2 2 datasets

ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 199 bp overlap

ChIP DE DE-FOXA2-2 312 bp overlap

GATA6 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 265 bp overlap

HNRNPK 2 datasets

ChIP HepG2 ENCFF493GNS 135 bp overlap

ChIP K562 ENCFF954RNO 177 bp overlap

ChIP K-562 ENCSR990AZC.MCM3.K-562 262 bp overlap

NR2F2 1 dataset

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 150 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 318 bp overlap

PATZ1 1 dataset

Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap

PCBP1 1 dataset

ChIP K562 ENCFF382QWQ 245 bp overlap

PHF19 1 dataset

ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 203 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 573 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 611 bp overlap

PRDM9 1 dataset

Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 340 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 334 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 565 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 621 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 436 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 500 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 684 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 635 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 603 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 376 bp overlap

Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap

Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap

Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap

Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap

SREBP2 2 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 314 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 267 bp overlap

SRSF7 1 dataset

ChIP K562 ENCFF189QPY 87 bp overlap

Stat5a::Stat5b 1 dataset

Motif DE_24h DE_24h-Stat5aStat5b_MA0519.2 9 bp overlap

TEAD1 1 dataset

ChIP H69 GSE62274.TEAD1.H69 151 bp overlap

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 275 bp overlap

ZNF135 1 dataset

Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap

ZNF213 1 dataset

Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap

ZNF281 1 dataset

Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap

ZNF460 3 datasets

Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap

Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap

Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap

ZNF701 1 dataset

Motif DE_24h DE_24h-ZNF701_MA1987.2 17 bp overlap

ZNF708 1 dataset

Motif DE_24h DE_24h-ZNF708_MA1730.2 9 bp overlap

ZNF740 1 dataset

Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap

Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap