chr1 : 174,871,376 174,871,876
500 bp 36 TFs 1 linked gene
This 500 bp open chromatin element is linked to RABGAP1L and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RABGAP1L 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:174,866,376 – 174,876,876
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 158 bp overlap
ATF2 1 dataset
ChIP H1 ENCFF295GZO 72 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 173 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 87 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 220 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 52 bp overlap
BRD4 4 datasets
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 102 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 109 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 306 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 136 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 174 bp overlap
CREM 1 dataset
ChIP GM12878 ENCFF391UGE 212 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 56 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 50 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 208 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 56 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 93 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 93 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 76 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 70 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 304 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 191 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 63 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 243 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 173 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 411 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 201 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 72 bp overlap
NANOG 3 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 122 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 305 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 107 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 151 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 162 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 126 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 58 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 292 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 242 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 108 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 71 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 225 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 51 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 202 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 99 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 203 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 71 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 181 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 182 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 117 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 69 bp overlap
TEAD4 4 datasets
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 228 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 80 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 62 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 150 bp overlap
YY1AP1 3 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 163 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 151 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 65 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 185 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF875HLX 91 bp overlap