chr8 : 85,467,833 85,468,325
492 bp 50 TFs 2 linked genes
This 492 bp open chromatin element is linked to CA2 and CA3-AS1 and is bound by 50 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CA2 3.8 kb Proximal Proximity
CA3-AS1 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:85,462,833 – 85,473,325
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 4 datasets
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 222 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 147 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 198 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 235 bp overlap
BRD3 1 dataset
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 307 bp overlap
BRD4 11 datasets
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 135 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 185 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 236 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 239 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 185 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 354 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 492 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 490 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD4.THP-1_iBET-BD1 255 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 229 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 454 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 130 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 169 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 467 bp overlap
CEBPA 9 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 201 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 120 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 203 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 236 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 223 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 199 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 286 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 202 bp overlap
ChIP U-937 ERP008568.CEBPA.U-937 121 bp overlap
CEBPB 6 datasets
ChIP THP-1_NS1-Pam3csk-0h GSE103477.CEBPB.THP-1_NS1-Pam3csk-0h 127 bp overlap
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 162 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 152 bp overlap
ChIP monocyte GSE98367.CEBPB.monocyte 125 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 107 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 117 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 233 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF335XTP 251 bp overlap
ChIP BLaER1 ENCFF346MCV 85 bp overlap
ChIP BLaER1 ENCFF896HSY 289 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 58 bp overlap
EGR1 1 dataset
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 205 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCFF305BNP 343 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 66 bp overlap
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 104 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 362 bp overlap
ESR1 1 dataset
ChIP MCF-7_LTED GSE86538.ESR1.MCF-7_LTED 234 bp overlap
EZH2 1 dataset
ChIP KG-1_shPLZF GSE109619.EZH2.KG-1_shPLZF 492 bp overlap
FOXA1 4 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 196 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 137 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 278 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 283 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 253 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 105 bp overlap
ChIP DE DE-FOXA2-1 425 bp overlap
ChIP DE DE-FOXA2-2 409 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 390 bp overlap
GATA1 2 datasets
ChIP erythroblast ENCFF867JAR 492 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 402 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 451 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 488 bp overlap
ChIP DE DE-GATA4-2 370 bp overlap
ChIP foregut GSE117136.GATA4.foregut 365 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 463 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 385 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 304 bp overlap
ChIP DE DE-GATA6-2 413 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 184 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 336 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 287 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 319 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 305 bp overlap
ChIP foregut GSE117136.GATA6.foregut 439 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 284 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 470 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 415 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 353 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 347 bp overlap
JMJD1C 1 dataset
ChIP NB4 GSE63484.JMJD1C.NB4 240 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 392 bp overlap
KDM1A 2 datasets
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 295 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 379 bp overlap
KMT2A 1 dataset
ChIP OCI-AML-3_DMSO GSE129636.KMT2A.OCI-AML-3_DMSO 492 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 242 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 172 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 329 bp overlap
MYB 2 datasets
ChIP THP-1 GSE90769.MYB.THP-1 474 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 314 bp overlap
MYC 1 dataset
ChIP NB4 ENCFF142PRP 185 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 150 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 151 bp overlap
NCOR2 1 dataset
ChIP AML_shaml1-eto GSE131939.NCOR2.AML_shaml1-eto 143 bp overlap
POLR2A 5 datasets
ChIP erythroblast ENCFF498VMR 163 bp overlap
ChIP erythroblast ENCFF498VMR 103 bp overlap
ChIP stomach ENCFF607ZPU 325 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
ChIP transverse colon ENCFF610RWV 425 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 137 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 235 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 110 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 160 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 154 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 150 bp overlap
RAD21 4 datasets
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 400 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 201 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 464 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 329 bp overlap
RUNX1 5 datasets
ChIP CD34_FETAL GSE70660.RUNX1.CD34_FETAL 132 bp overlap
ChIP HL-60 GSE107553.RUNX1.HL-60 106 bp overlap
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 223 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 212 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 254 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 235 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 116 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 181 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 200 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 125 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 151 bp overlap
SPI1 9 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 159 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 217 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 277 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 278 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 379 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 278 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 240 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 146 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 384 bp overlap
STAT1_pS727 2 datasets
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 225 bp overlap
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 169 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 162 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 446 bp overlap
ZKSCAN2 1 dataset
ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 215 bp overlap