chr7 : 27,240,139 – 27,240,815
676 bp 47 TFs 3 linked genes
This 676 bp open chromatin element is linked to ENSG00000253308, EVX1, and EVX1-AS and is bound by 47 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000253308 412 bp At TSS Proximity
EVX1 2.0 kb Proximal Proximity
EVX1-AS 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:27,235,139 – 27,245,815
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 484 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 106 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 484 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 607 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 93 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 189 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 362 bp overlap
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 279 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 359 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 160 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 212 bp overlap
ETS1 4 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 216 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 171 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 283 bp overlap
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 218 bp overlap
EZH2 41 datasets
ChIP A673 ENCFF790MVL 125 bp overlap
ChIP A673 ENCFF790MVL 178 bp overlap
ChIP A673 ENCFF955JRZ 125 bp overlap
ChIP A673 ENCFF955JRZ 506 bp overlap
ChIP A673 ENCFF955JRZ 433 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 136 bp overlap
ChIP GM12878 ENCFF635TDF 85 bp overlap
ChIP GM23338 ENCFF613YON 676 bp overlap
ChIP GM23338 ENCFF886DXX 270 bp overlap
ChIP H1 ENCFF232NZA 676 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 522 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 331 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 306 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 500 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 202 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 315 bp overlap
ChIP K562 ENCFF494QJK 136 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 604 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 676 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 228 bp overlap
ChIP astrocyte ENCFF365JTP 255 bp overlap
ChIP astrocyte ENCFF365JTP 263 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 155 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 676 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 334 bp overlap
ChIP fibroblast of lung ENCFF479BAW 439 bp overlap
ChIP hepatocyte ENCFF552DZB 55 bp overlap
ChIP keratinocyte ENCFF070STK 313 bp overlap
ChIP keratinocyte ENCFF070STK 321 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 111 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 123 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 310 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 140 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 315 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 254 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 385 bp overlap
ChIP neural cell ENCFF610EPB 145 bp overlap
ChIP neural cell ENCFF610EPB 328 bp overlap
ChIP neural progenitor cell ENCFF018MKA 206 bp overlap
ChIP neural progenitor cell ENCFF472NFV 676 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 316 bp overlap
EZH2_phosphoT487 2 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 207 bp overlap
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 102 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 284 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 314 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 381 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 502 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 676 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 550 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 270 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 617 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 374 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 223 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 604 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 626 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 160 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 216 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 252 bp overlap
NANOG 4 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 191 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 333 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 239 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 184 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 185 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 118 bp overlap
POLR2A 4 datasets
ChIP sigmoid colon ENCFF748YVT 136 bp overlap
ChIP vagina ENCFF216BYP 255 bp overlap
ChIP vagina ENCFF384GAB 294 bp overlap
ChIP vagina ENCFF384GAB 631 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 407 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 95 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 170 bp overlap
RNF2 1 dataset
ChIP Hep-G2 ENCSR523XCR.RNF2.Hep-G2 136 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 182 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 306 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 402 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 55 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 385 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 676 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 405 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 200 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 302 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 309 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 416 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 220 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 316 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 302 bp overlap
SUZ12 8 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 665 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 620 bp overlap
ChIP H1 ENCFF881NFR 676 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 60 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 96 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 290 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 676 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 236 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 270 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 276 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 148 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 141 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 126 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 228 bp overlap
Huangfu Lab · Publications · Resources · Contact