chr7 : 24,464,933 – 24,465,440
507 bp 47 TFs 1 linked gene
This 507 bp open chromatin element is linked to PALS2 and is bound by 47 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PALS2 108.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:24,459,933 – 24,470,440
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
AR 8 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 227 bp overlap
ChIP VCaP GSE32892.AR.VCaP 231 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 224 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 210 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 136 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 222 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 304 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 251 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 296 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 149 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 236 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 81 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 301 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 207 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 114 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 218 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 112 bp overlap
E2F4 1 dataset
ChIP HeLa-S3 ENCFF669WYW 232 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 277 bp overlap
EP300 2 datasets
ChIP HeLa-S3 ENCFF245KNK 344 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 243 bp overlap
ERG 6 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 218 bp overlap
ChIP VCaP GSE28950.ERG.VCaP 219 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 154 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 153 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 363 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 339 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 255 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 157 bp overlap
ChIP DE DE-FOXA2-1 274 bp overlap
ChIP DE DE-FOXA2-2 342 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 134 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 195 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 253 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 174 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 158 bp overlap
GATA2 8 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 242 bp overlap
ChIP SH-SY5Y ENCFF485YIB 307 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 361 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 340 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 289 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 230 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 206 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 210 bp overlap
GATA3 6 datasets
ChIP A1A3_Brg1KD_Dex GSE112491.GATA3.A1A3_Brg1KD_Dex 293 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 390 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 367 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 296 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 205 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 294 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 260 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 236 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 507 bp overlap
ChIP DE DE-GATA4-2 507 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 279 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 412 bp overlap
ChIP foregut GSE117136.GATA4.foregut 439 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 445 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 368 bp overlap
GATA6 17 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 323 bp overlap
ChIP DE DE-GATA6-1 507 bp overlap
ChIP DE DE-GATA6-2 507 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 507 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 500 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 496 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 507 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 507 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 507 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 159 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 226 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 447 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 502 bp overlap
ChIP foregut GSE117136.GATA6.foregut 375 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 448 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 418 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 374 bp overlap
INSM1 1 dataset
Motif DE_72h DE_72h-INSM1_MA0155.1 12 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 340 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 253 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 316 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 231 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 122 bp overlap
MITF 5 datasets
ChIP 501-mel GSE137522.MITF.501-mel 213 bp overlap
ChIP 501-mel GSE61965.MITF.501-mel 181 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 271 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 274 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 200 bp overlap
MYB 4 datasets
ChIP DU528 GSE94000.MYB.DU528 213 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 191 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 335 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 406 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 161 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 133 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 305 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 205 bp overlap
PRDM9 1 dataset
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
RAD51 1 dataset
ChIP K-562 ENCSR524BUE.RAD51.K-562 99 bp overlap
RREB1 1 dataset
Motif DE_72h DE_72h-RREB1_MA0073.2 19 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 84 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 380 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 290 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 296 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 304 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 319 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 349 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 174 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 298 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 507 bp overlap
SREBF1 1 dataset
Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap
TAL1 3 datasets
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 405 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 246 bp overlap
TCF7L2 2 datasets
ChIP HeLa-S3 ENCFF673QAB 420 bp overlap
ChIP HeLa-S3 ENCSR000EVE.TCF7L2.HeLa-S3 330 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 80 bp overlap
USF1 7 datasets
ChIP GM12878 ENCSR000BGI.USF1.GM12878 115 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF201JKA 269 bp overlap
ChIP HepG2 ENCFF807KYJ 184 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 197 bp overlap
ChIP K562 ENCFF633EZB 203 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 139 bp overlap
USF2 5 datasets
ChIP GM12878 GSE97661.USF2.GM12878 206 bp overlap
ChIP HeLa-S3 ENCFF765YUZ 229 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 224 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 216 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 150 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 364 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 330 bp overlap
ZNF701 1 dataset
Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap
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