chr6 : 164,228,204 – 164,228,478

274 bp 77 TFs 1 linked gene

This 274 bp open chromatin element is linked to ENSG00000288648 and is bound by 77 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000288648		at TSS	At TSS	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

77 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 204 bp overlap

ASCL1 1 dataset

Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap

Arid3a 1 dataset

Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap

BARX1 1 dataset

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CTCF 1 dataset

ChIP U-937 ERP008568.CTCF.U-937 53 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 124 bp overlap

DLX1 1 dataset

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 59 bp overlap

EN2 1 dataset

Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap

ESR1 2 datasets

ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 138 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 93 bp overlap

ETV6 1 dataset

ChIP WTC11 ENCFF812SCD 274 bp overlap

FIGLA 1 dataset

Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap

GBX1 1 dataset

Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HNF4A 1 dataset

ChIP KATO-III GSE114018.HNF4A.KATO-III 135 bp overlap

HOXA7 1 dataset

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

HOXB4 1 dataset

Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap

HOXB9 1 dataset

Motif ES_0h ES_0h-HOXB9_MA1503.2 9 bp overlap

HOXC10 1 dataset

Motif ES_0h ES_0h-HOXC10_MA0905.2 9 bp overlap

HOXC13 1 dataset

Motif ES_0h ES_0h-HOXC13_MA0907.2 9 bp overlap

HOXC4 1 dataset

Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap

HOXD12 1 dataset

Motif ES_0h ES_0h-HOXD12_MA0873.2 10 bp overlap

HOXD4 1 dataset

Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap

Hoxa11 1 dataset

Motif ES_0h ES_0h-Hoxa11_MA0911.2 9 bp overlap

IRF2 1 dataset

Motif ES_0h ES_0h-IRF2_MA0051.2 16 bp overlap

IRF6 1 dataset

Motif ES_0h ES_0h-IRF6_MA1509.1 9 bp overlap

ISL1 1 dataset

ChIP Huh-7 GSE77957.ISL1.Huh-7 126 bp overlap

LBX1 1 dataset

Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap

MSX1 1 dataset

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NANOG 1 dataset

ChIP WA01 ENCSR000BMT.NANOG.WA01 123 bp overlap

NFATC4 1 dataset

Motif ES_0h ES_0h-NFATC4_MA1525.3 9 bp overlap

NFIA 1 dataset

Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap

NKX6-1 1 dataset

Motif ES_0h ES_0h-NKX6-1_MA0674.2 7 bp overlap

NKX6-3 1 dataset

Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap

Nfat5 1 dataset

Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap

Nfatc2 1 dataset

Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap

Nobox 1 dataset

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

Nr2e1 1 dataset

Motif ES_0h ES_0h-Nr2e1_MA0676.1 9 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 224 bp overlap

POU6F1 1 dataset

Motif ES_0h ES_0h-POU6F1_MA1549.2 7 bp overlap

POU6F2 1 dataset

Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap

PRRX2 1 dataset

Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap

RAX 1 dataset

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

RELA 1 dataset

Motif ES_0h ES_0h-RELA_MA0107.1 10 bp overlap

RUNX3 1 dataset

Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 197 bp overlap

SNAI1 1 dataset

Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap

SNAI3 1 dataset

Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap

SP5 1 dataset

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

STAT3 3 datasets

ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 274 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 134 bp overlap

ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 87 bp overlap

TBX18 1 dataset

Motif ES_0h ES_0h-TBX18_MA1565.2 9 bp overlap

TCF12 1 dataset

Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap

TCF7L2 1 dataset

Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap

THRA 1 dataset

Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap

ZEB1 1 dataset

Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap

ZNF189 1 dataset

Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 205 bp overlap

ZNF354C 1 dataset

Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap

ZNF418 1 dataset

Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap

ZNF460 1 dataset

Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap

ZNF582 1 dataset

Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap

Zfp809 1 dataset

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap

Zfx 1 dataset

Motif ES_0h ES_0h-Zfx_MA0146.3 10 bp overlap

Zic2 1 dataset

Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap