chr6 : 127,460,272 127,460,722
450 bp 37 TFs 1 linked gene
This 450 bp open chromatin element is linked to KIAA0408 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KIAA0408 883 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:127,455,272 – 127,465,722
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 84 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 271 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 181 bp overlap
CDK7 1 dataset
ChIP Jurkat GSE83777.CDK7.Jurkat 243 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 343 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 212 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 163 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 117 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 124 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 193 bp overlap
EZH2 1 dataset
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 293 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 192 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 189 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 162 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 285 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 169 bp overlap
GATA3 6 datasets
ChIP CCRF-CEM GSE33850.GATA3.CCRF-CEM 77 bp overlap
ChIP CD4_TH2 GSE72266.GATA3.CD4_TH2 214 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 316 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 255 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 231 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 228 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 370 bp overlap
ChIP DE DE-GATA4-2 415 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 248 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-2 329 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 358 bp overlap
JMJD1C 1 dataset
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 98 bp overlap
KDM1A 1 dataset
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 194 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 67 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 226 bp overlap
LMO2 3 datasets
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 151 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 170 bp overlap
LYL1 1 dataset
ChIP Kasumi-1 GSE63484.LYL1.Kasumi-1 127 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 139 bp overlap
MYB 6 datasets
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 138 bp overlap
ChIP DU528 GSE94000.MYB.DU528 400 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 181 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 222 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 169 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 246 bp overlap
REST 1 dataset
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 84 bp overlap
RUNX1 5 datasets
ChIP Jurkat GSE68976.RUNX1.Jurkat 159 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 139 bp overlap
ChIP Jurkat GSE29180.RUNX1.Jurkat 81 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 177 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 177 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 209 bp overlap
SMAD1 1 dataset
ChIP CD34_PROG_BMP GSE29194.SMAD1.CD34_PROG_BMP 157 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 129 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 166 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 374 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 159 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 292 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 287 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 217 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 61 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 72 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 151 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 165 bp overlap
TAL1 5 datasets
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 184 bp overlap
ChIP Jurkat GSE29180.TAL1.Jurkat 117 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 286 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 189 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 275 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 144 bp overlap
TCF12 1 dataset
ChIP Jurkat GSE29180.TCF12.Jurkat 111 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 227 bp overlap
TCF7L2 1 dataset
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
Vdr 1 dataset
Motif DE_36h DE_36h-Vdr_MA0693.4 7 bp overlap
ZMIZ1 1 dataset
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 131 bp overlap