chr6 : 121,493,442 – 121,494,754

1,312 bp 66 TFs 0 linked genes

This 1.3 kb open chromatin element has no linked target genes and is bound by 66 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

66 transcription factors

BACH2 1 dataset

Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap

BRD3 2 datasets

ChIP H-1_DE GSE126661.BRD3.H-1_DE 98 bp overlap

ChIP H-1_DE GSE126661.BRD3.H-1_DE 491 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 200 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 141 bp overlap

ERF::FOXO1 1 dataset

Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXA1 1 dataset

Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 832 bp overlap

ChIP DE DE-FOXA2-2 664 bp overlap

Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap

FOXA3 1 dataset

Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap

FOXI1 1 dataset

Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap

FOXP1 1 dataset

Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap

FOXP4 1 dataset

Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap

FOXS1 1 dataset

Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap

Foxl2 2 datasets

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 611 bp overlap

ChIP DE DE-GATA4-2 724 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 412 bp overlap

ChIP DE DE-GATA6-2 592 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 391 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 568 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 424 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 391 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 481 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 365 bp overlap

GLIS3 1 dataset

Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

HMBOX1 2 datasets

Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap

Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap

HOXB13 3 datasets

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap

IRF3 4 datasets

Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap

Motif DE_60h DE_60h-IRF3_MA1418.2 17 bp overlap

Motif DE_72h DE_72h-IRF3_MA1418.2 17 bp overlap

Irf1 2 datasets

Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

JDP2 1 dataset

Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 349 bp overlap

Lhx3 2 datasets

Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap

Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap

MAF::NFE2 1 dataset

Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap

MYBL1 2 datasets

Motif DE_60h DE_60h-MYBL1_MA0776.1 12 bp overlap

Motif DE_72h DE_72h-MYBL1_MA0776.1 12 bp overlap

MYOD1 1 dataset

Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 262 bp overlap

NFE2 1 dataset

Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap

NR4A1 2 datasets

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

Motif DE_72h DE_72h-NR4A1_MA1112.3 8 bp overlap

Nfatc2 1 dataset

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

Nfe2l2 1 dataset

Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 280 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 495 bp overlap

PPARA::RXRA 2 datasets

Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap

Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

Prdm14 3 datasets

Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap

Motif DE_60h DE_60h-Prdm14_MA1998.2 8 bp overlap

Motif DE_72h DE_72h-Prdm14_MA1998.2 8 bp overlap

Ptf1A 1 dataset

Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap

RARB 1 dataset

Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap

RARG 1 dataset

Motif DE_12h DE_12h-RARG_MA1553.2 13 bp overlap

REST 1 dataset

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

RXRB 1 dataset

Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 754 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 805 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 1073 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 937 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 800 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 1024 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 715 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 714 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 279 bp overlap

SNAI2 1 dataset

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 453 bp overlap

Stat2 2 datasets

Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap

Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap

Stat6 2 datasets

Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap

Motif DE_72h DE_72h-Stat6_MA0520.2 10 bp overlap

TBP 2 datasets

Motif DE_60h DE_60h-TBP_MA0108.3 7 bp overlap

Motif DE_72h DE_72h-TBP_MA0108.3 7 bp overlap

TCF4 1 dataset

Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap

TCF7L2 2 datasets

Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap

Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap

THRB 1 dataset

Motif DE_12h DE_12h-THRB_MA1575.2 17 bp overlap

ZBTB26 1 dataset

Motif DE_60h DE_60h-ZBTB26_MA1579.2 8 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZKSCAN3 2 datasets

Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap

Motif DE_60h DE_60h-ZKSCAN3_MA1973.2 14 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF354A 2 datasets

Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap

Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap

ZNF530 1 dataset

Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap

ZNF558 1 dataset

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

ZNF582 2 datasets

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

Motif DE_60h DE_60h-ZNF582_MA1983.2 19 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap