chr6 : 96,734,495 96,735,133
638 bp 73 TFs 0 linked genes
This 638 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:96,729,495 – 96,740,133
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 32 datasets
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 108 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 300 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 215 bp overlap
ChIP LNCaP ERP001226.AR.LNCaP 167 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 153 bp overlap
ChIP LNCaP_ETOH GSE69043.AR.LNCaP_ETOH 138 bp overlap
ChIP LNCaP_R1881 GSE69043.AR.LNCaP_R1881 220 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 109 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 231 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 250 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 273 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 281 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 126 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 140 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 105 bp overlap
ChIP VCaP GSE148358.AR.VCaP 273 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 192 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 435 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 381 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 274 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 453 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 448 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 282 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 287 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 147 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 128 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 173 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 274 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 284 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 185 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 134 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 64 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 312 bp overlap
BRD4 1 dataset
ChIP VCaP GSE148358.BRD4.VCaP 295 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 219 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 166 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 169 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 196 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 223 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 126 bp overlap
ChIP MCF-7_Fulvestrant_HC11 GSE102882.ESR1.MCF-7_Fulvestrant_HC11 222 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 262 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 149 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 256 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 238 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 163 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 256 bp overlap
FOXA1 30 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 340 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 544 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 278 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 395 bp overlap
Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 300 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 134 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 128 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 185 bp overlap
ChIP LNCaP_DMSO GSE114274.FOXA1.LNCaP_DMSO 177 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 341 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 362 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 480 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 267 bp overlap
ChIP MCF-7 GSE124667.FOXA1.MCF-7 158 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 191 bp overlap
ChIP MCF-7_1117 GSE124667.FOXA1.MCF-7_1117 281 bp overlap
ChIP MCF-7_1118 GSE124667.FOXA1.MCF-7_1118 227 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 271 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 193 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 202 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 206 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 172 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 221 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 241 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 279 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 378 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 419 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 202 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 282 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 520 bp overlap
ChIP DE DE-FOXA2-2 638 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 391 bp overlap
FOXA3 1 dataset
Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap
FOXD1 1 dataset
Motif DE_60h DE_60h-FOXD1_MA0031.2 7 bp overlap
FOXD3 1 dataset
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXG1 1 dataset
Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap
Foxf1 1 dataset
Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxo1 1 dataset
Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 126 bp overlap
GATA2 6 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 248 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 248 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 223 bp overlap
ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 219 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 311 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 274 bp overlap
GATA3 10 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 283 bp overlap
ChIP MCF-7 ENCFF437NQS 371 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 262 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 268 bp overlap
ChIP MCF-7 GSE40129.GATA3.MCF-7 131 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 224 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 217 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 195 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 195 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 201 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 516 bp overlap
ChIP DE DE-GATA4-2 638 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 228 bp overlap
ChIP foregut GSE117136.GATA4.foregut 536 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 436 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 515 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 592 bp overlap
ChIP DE DE-GATA6-2 594 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 530 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 298 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 524 bp overlap
ChIP foregut GSE117136.GATA6.foregut 487 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 279 bp overlap
HSF1 1 dataset
Motif DE_60h DE_60h-HSF1_MA0486.2 13 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
JUND 1 dataset
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
Lef1 1 dataset
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
MSC 1 dataset
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
NFIA 1 dataset
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIC 1 dataset
Motif DE_60h DE_60h-NFIC_MA0161.3 7 bp overlap
NFIX 1 dataset
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
NR1I2 1 dataset
Motif DE_60h DE_60h-NR1I2_MA1533.2 15 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Nr5A2 1 dataset
Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 234 bp overlap
RARA 1 dataset
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap
RORB 1 dataset
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
Rarb 1 dataset
Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 145 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 308 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 205 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 240 bp overlap
SOX4 1 dataset
Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 179 bp overlap
Six3 1 dataset
Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
TCF7 1 dataset
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 165 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap