chr6 : 77,814,027 – 77,815,423
1,396 bp 58 TFs 0 linked genes
This 1.4 kb open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:77,809,027 – 77,820,423
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
AR 1 dataset
ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 247 bp overlap
ATF4 2 datasets
Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap
Motif DE_72h DE_72h-ATF4_MA0833.3 10 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 130 bp overlap
CEBPG 2 datasets
Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap
Motif DE_72h DE_72h-CEBPG_MA1636.2 10 bp overlap
CTCF 1 dataset
ChIP GM23338 ENCFF832KWE 236 bp overlap
Crx 3 datasets
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dmbx1 2 datasets
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
Dmrt1 3 datasets
Motif DE_48h DE_48h-Dmrt1_MA1603.2 9 bp overlap
Motif DE_60h DE_60h-Dmrt1_MA1603.2 9 bp overlap
Motif DE_72h DE_72h-Dmrt1_MA1603.2 9 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 372 bp overlap
ChIP hESC GSE26097.EOMES.hESC 186 bp overlap
FOXA2 3 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 329 bp overlap
ChIP DE DE-FOXA2-1 1337 bp overlap
ChIP DE DE-FOXA2-2 1385 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 222 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 150 bp overlap
GATA2 2 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 215 bp overlap
ChIP HepG2 ENCFF905PYM 371 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 1378 bp overlap
ChIP DE DE-GATA4-2 1396 bp overlap
ChIP foregut GSE117136.GATA4.foregut 485 bp overlap
ChIP foregut GSE117136.GATA4.foregut 300 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 467 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 453 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 400 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 386 bp overlap
GATA6 17 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 202 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 626 bp overlap
ChIP DE DE-GATA6-1 531 bp overlap
ChIP DE DE-GATA6-2 1396 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 484 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 295 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 413 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
ChIP foregut GSE117136.GATA6.foregut 512 bp overlap
ChIP foregut GSE117136.GATA6.foregut 286 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 406 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 514 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 382 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 307 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 265 bp overlap
GSC 3 datasets
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HNF1A 3 datasets
Motif DE_48h DE_48h-HNF1A_MA0046.3 13 bp overlap
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
HNF4A 6 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 266 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 259 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 79 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 236 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF146SSF 361 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 156 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 273 bp overlap
MEIS1 3 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_72h DE_72h-MGAEVX1_MA1960.2 11 bp overlap
NEUROD1 10 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 393 bp overlap
ChIP D283-Med GSE92582.NEUROD1.D283-Med 546 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 286 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 440 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 200 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 329 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 245 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 366 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 220 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 281 bp overlap
Nanog 1 dataset
Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap
OSR1 3 datasets
Motif DE_48h DE_48h-OSR1_MA1542.2 8 bp overlap
Motif DE_60h DE_60h-OSR1_MA1542.2 8 bp overlap
Motif DE_72h DE_72h-OSR1_MA1542.2 8 bp overlap
OTX1 3 datasets
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 135 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 324 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 260 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 464 bp overlap
PITX1 3 datasets
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 3 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PPARD 3 datasets
Motif DE_48h DE_48h-PPARD_MA1550.2 14 bp overlap
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
Motif DE_72h DE_72h-PPARD_MA1550.2 14 bp overlap
PROX1 2 datasets
Motif DE_60h DE_60h-PROX1_MA0794.1 12 bp overlap
Motif DE_72h DE_72h-PROX1_MA0794.1 12 bp overlap
Plagl1 2 datasets
Motif DE_60h DE_60h-Plagl1_MA1615.2 8 bp overlap
Motif DE_72h DE_72h-Plagl1_MA1615.2 8 bp overlap
Pparg::Rxra 2 datasets
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
RHOXF1 3 datasets
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RXRG 3 datasets
Motif DE_48h DE_48h-RXRG_MA0856.1 14 bp overlap
Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap
Motif DE_72h DE_72h-RXRG_MA0856.1 14 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 783 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 429 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 240 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 294 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 159 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 257 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 163 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 237 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 226 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 113 bp overlap
SPIB 2 datasets
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
Spi1 2 datasets
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 332 bp overlap
TBX19 2 datasets
Motif DE_60h DE_60h-TBX19_MA0804.2 17 bp overlap
Motif DE_72h DE_72h-TBX19_MA0804.2 17 bp overlap
TBXT 2 datasets
Motif DE_60h DE_60h-TBXT_MA0009.2 16 bp overlap
Motif DE_72h DE_72h-TBXT_MA0009.2 16 bp overlap
ZKSCAN5 2 datasets
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 88 bp overlap
ZNF24 2 datasets
Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF257 2 datasets
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 216 bp overlap
ZNF667 1 dataset
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
ZNF675 2 datasets
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
Motif DE_72h DE_72h-ZNF675_MA1714.2 19 bp overlap
ZNF684 3 datasets
Motif DE_48h DE_48h-ZNF684_MA1600.2 14 bp overlap
Motif DE_60h DE_60h-ZNF684_MA1600.2 14 bp overlap
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
Znf423 2 datasets
Motif DE_60h DE_60h-Znf423_MA0116.1 15 bp overlap
Motif DE_72h DE_72h-Znf423_MA0116.1 15 bp overlap
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