chr6 : 49,638,847 49,639,534
687 bp 44 TFs 1 linked gene
This 687 bp open chromatin element is linked to RHAG and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RHAG 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:49,633,847 – 49,644,534
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 143 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 464 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 147 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 202 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 339 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 251 bp overlap
BRD4 2 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 350 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 186 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 269 bp overlap
ChIP K562 ENCFF673OEZ 381 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 456 bp overlap
EP300 2 datasets
ChIP K562 ENCFF226VMS 317 bp overlap
ChIP K562 ENCFF226VMS 239 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 167 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF207NVJ 78 bp overlap
ChIP HepG2 ENCFF740VZW 80 bp overlap
FOXA2 3 datasets
ChIP HepG2 ENCFF533COJ 82 bp overlap
ChIP HepG2 ENCFF570ABM 102 bp overlap
ChIP HepG2 ENCFF894AYY 141 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 429 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 538 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-2 357 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 347 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 321 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 525 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 334 bp overlap
GFI1B 2 datasets
ChIP CD34 GSE52924.GFI1B.CD34 236 bp overlap
ChIP K-562 ENCSR509GDT.GFI1B.K-562 300 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 239 bp overlap
ChIP K562 ENCFF928TKZ 369 bp overlap
ChIP K562 ENCFF968WBH 434 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR000BMG.HDAC2.K-562 185 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 255 bp overlap
ChIP K562 ENCFF744ALD 111 bp overlap
ChIP K562 ENCFF919OMP 370 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 83 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 390 bp overlap
JUND 1 dataset
ChIP Kasumi-1_RUNX1-KO GSE117105.JUND.Kasumi-1_RUNX1-KO 87 bp overlap
KDM1A 6 datasets
ChIP K-562 GSE117944.KDM1A.K-562 309 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 240 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 255 bp overlap
ChIP K562 ENCFF128TYE 423 bp overlap
ChIP K562 ENCFF133OLU 409 bp overlap
ChIP K562 ENCFF934ZRG 398 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 487 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 203 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 130 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 412 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 286 bp overlap
ChIP K562 ENCFF320GSD 243 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 174 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 79 bp overlap
ChIP HepG2 ENCFF526NOJ 216 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 292 bp overlap
ChIP K562 ENCFF286KMN 140 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 298 bp overlap
ChIP K562 ENCFF236IUS 297 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 277 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 430 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 683 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 587 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 651 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 658 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 308 bp overlap
ChIP K562 ENCFF059YCJ 165 bp overlap
STAT3 3 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 207 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 194 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 127 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 365 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 305 bp overlap
ZNF324 1 dataset
ChIP K562 ENCFF702GEM 285 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 257 bp overlap