chr6 : 33,346,609 33,347,126
517 bp 37 TFs 20 linked genes
This 517 bp open chromatin element is linked to 20 target genes and is bound by 37 transcription factors.
Linked Genes
20 genes
Gene Expression Dist. to TSS Distance Link type
DAXX 23.8 kb Distal Multiome
TAPBP 32.6 kb Distal Multiome
KIFC1 45.0 kb Distal Multiome
ENSG00000289100 47.3 kb Distal Multiome
RGL2 49.1 kb Distal Multiome
PFDN6 57.2 kb Distal Multiome
WDR46 57.6 kb Distal Multiome
PHF1 63.6 kb Distal Multiome
B3GALT4 69.7 kb Distal Multiome
CUTA 71.5 kb Distal Multiome
SYNGAP1 73.5 kb Distal Multiome
RPS18 74.7 kb Distal Multiome
VPS52 74.9 kb Distal Multiome
HCG25 97.3 kb Distal Multiome
ZBTB9 107.7 kb Distal Multiome
RING1 138.3 kb Distal Multiome
SLC39A7 146.0 kb Distal Multiome
RXRB 146.1 kb Distal Multiome
BAK1 233.5 kb Distal Multiome
ITPR3 274.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:33,341,609 – 33,352,126
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 61 bp overlap
DUX4 1 dataset
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCFF282FWZ 107 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 469 bp overlap
ChIP DE DE-FOXA2-2 286 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 517 bp overlap
ChIP DE DE-GATA4-2 517 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 517 bp overlap
ChIP DE DE-GATA6-2 517 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 401 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 432 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 397 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
HOXB13 1 dataset
Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap
Isl1 1 dataset
Motif DE_72h DE_72h-Isl1_MA1608.2 7 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 92 bp overlap
KLF1 1 dataset
Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_72h DE_72h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_72h DE_72h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_72h DE_72h-KLF13_MA0657.2 17 bp overlap
KLF14 1 dataset
Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif DE_72h DE_72h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_72h DE_72h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_72h DE_72h-KLF7_MA1959.2 8 bp overlap
NKX6-3 1 dataset
Motif DE_72h DE_72h-NKX6-3_MA1530.2 8 bp overlap
NR1I3 1 dataset
Motif DE_72h DE_72h-NR1I3_MA1534.2 8 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 219 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 215 bp overlap
SIX2 1 dataset
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 481 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 517 bp overlap
SP3 1 dataset
Motif DE_72h DE_72h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_72h DE_72h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_72h DE_72h-SP9_MA1564.2 10 bp overlap
ZFP14 1 dataset
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZNF410 1 dataset
Motif DE_72h DE_72h-ZNF410_MA0752.2 16 bp overlap