chr5 : 174,725,885 174,726,052
167 bp 44 TFs 1 linked gene
This 167 bp open chromatin element is linked to MSX2 and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MSX2 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:174,720,885 – 174,731,052
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 105 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 142 bp overlap
ATF2 4 datasets
ChIP HEK293 ENCFF194VKZ 98 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 72 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 62 bp overlap
ChIP HepG2 ENCFF955VER 104 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 109 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 98 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 167 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 110 bp overlap
CHD1 1 dataset
ChIP MCF-7 ENCSR360JOC.CHD1.MCF-7 112 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 96 bp overlap
ESR1 6 datasets
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 113 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 80 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 167 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 104 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 167 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 167 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 121 bp overlap
EZH2 8 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 122 bp overlap
ChIP GM23338 ENCFF613YON 167 bp overlap
ChIP H1 ENCFF232NZA 167 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 167 bp overlap
ChIP hESC GSE113817.EZH2.hESC 167 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 167 bp overlap
ChIP neural progenitor cell ENCFF018MKA 167 bp overlap
ChIP neural progenitor cell ENCFF472NFV 167 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 61 bp overlap
GATA2 1 dataset
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 125 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 53 bp overlap
HDAC1 1 dataset
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_4-OHT_clone14 120 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 75 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 118 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 166 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 103 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 167 bp overlap
JUN 1 dataset
ChIP 786-O GSE86092.JUN.786-O 124 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 167 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 167 bp overlap
KMT2A 2 datasets
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 167 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 147 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 167 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 78 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 69 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 167 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 167 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 167 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 167 bp overlap
SCRT1 3 datasets
ChIP HEK293 ENCFF513YVP 167 bp overlap
ChIP HEK293 ENCFF513YVP 90 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 167 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 167 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 167 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 167 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 167 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 167 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 142 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 118 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 167 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF881NFR 167 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 167 bp overlap
TEAD4 4 datasets
ChIP MCF-7_DMSO GSE125594.TEAD4.MCF-7_DMSO 71 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 78 bp overlap
ChIP MCF-7_Veh GSE125594.TEAD4.MCF-7_Veh 61 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 60 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 165 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 167 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 167 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 167 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 149 bp overlap