chr5 : 154,721,510 154,721,854
344 bp 42 TFs 1 linked gene
This 344 bp open chromatin element is linked to LARP1 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LARP1 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:154,716,510 – 154,726,854
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 344 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CTCF 1 dataset
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 243 bp overlap
ESR1 2 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 109 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 98 bp overlap
ETS1 3 datasets
ChIP GM23338 ENCFF701IZH 315 bp overlap
ChIP GM23338 ENCFF701IZH 190 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 146 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 332 bp overlap
FOXK1 2 datasets
ChIP WTC11 ENCFF875IGU 273 bp overlap
ChIP WTC11 ENCFF875IGU 259 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 229 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 191 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 287 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 117 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 344 bp overlap
ChIP K562 ENCFF348IBL 233 bp overlap
JUN 1 dataset
ChIP ESC S24-ESC-d0-JUN-exp1 191 bp overlap
KDM4A 1 dataset
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 147 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCFF065NZG 270 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 139 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 344 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 256 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 171 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 308 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 188 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 96 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 147 bp overlap
PGR 2 datasets
ChIP T-47D_E2PG GSE68356.PGR.T-47D_E2PG 56 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 59 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 72 bp overlap
ChIP K562 ENCFF236IUS 172 bp overlap
POLR2A 6 datasets
ChIP GM23338 ENCFF450WCS 249 bp overlap
ChIP GM23338 ENCFF450WCS 106 bp overlap
ChIP H1 ENCFF566JSR 344 bp overlap
ChIP H1 ENCFF770YBQ 340 bp overlap
ChIP H1 ENCFF770YBQ 126 bp overlap
ChIP H1 ENCFF833NJP 297 bp overlap
POU5F1 8 datasets
ChIP BG03 GSE21614.POU5F1.BG03 144 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 268 bp overlap
ChIP GM23338 ENCFF333SNB 162 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 344 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 229 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 118 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 344 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 239 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 155 bp overlap
PRDM15 2 datasets
ChIP WTC11 ENCFF108TMF 344 bp overlap
ChIP WTC11 ENCFF108TMF 187 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 147 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 165 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 117 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 139 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 145 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 291 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 175 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 267 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 224 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 238 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 258 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 178 bp overlap
SOX2 3 datasets
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 259 bp overlap
ChIP hESC GSE18292.SOX2.hESC 152 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 330 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 152 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 174 bp overlap
TBP 8 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 331 bp overlap
ChIP hESC GSE122298.TBP.hESC 344 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 305 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 113 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 136 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 120 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 344 bp overlap
ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 318 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 269 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 342 bp overlap
TEAD4 4 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 96 bp overlap
ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 101 bp overlap
ChIP H1 ENCFF778PAX 185 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 200 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 329 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 85 bp overlap