chr5 : 152,437,957 – 152,438,187
230 bp 74 TFs 0 linked genes
This 230 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:152,432,957 – 152,443,187
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
ATF2 2 datasets
ChIP H1 ENCFF295GZO 230 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 191 bp overlap
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BCL11A 2 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 105 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 230 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 230 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 222 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 155 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx2 2 datasets
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 105 bp overlap
EN2 2 datasets
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
Motif ES_0h ES_0h-EN2_MA0642.3 7 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 230 bp overlap
ChIP DE DE-FOXA2-2 230 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 217 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 200 bp overlap
GBX1 2 datasets
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
Motif ES_0h ES_0h-GBX1_MA0889.2 7 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 230 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 158 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 152 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif ES_0h ES_0h-HNF4G_MA0484.3 9 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 207 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 230 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 230 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 230 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 230 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 230 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 230 bp overlap
LBX1 2 datasets
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
Motif ES_0h ES_0h-LBX1_MA0618.2 7 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LHX9 2 datasets
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Motif ES_0h ES_0h-LHX9_MA0701.3 7 bp overlap
Lhx1 2 datasets
Motif DE_12h DE_12h-Lhx1_MA1518.3 10 bp overlap
Motif ES_0h ES_0h-Lhx1_MA1518.3 10 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 199 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 230 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 165 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 230 bp overlap
ChIP hESC GSE18292.NANOG.hESC 88 bp overlap
ChIP hESC GSE18292.NANOG.hESC 86 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
Nr2e1 1 dataset
Motif ES_0h ES_0h-Nr2e1_MA0676.1 9 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 72 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 111 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 230 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 195 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 230 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 156 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
PRRX2 2 datasets
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Motif ES_0h ES_0h-PRRX2_MA0075.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RFX4 1 dataset
Motif ES_0h ES_0h-RFX4_MA0799.3 13 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 50 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 205 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 230 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 230 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 230 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 161 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 230 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 230 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 193 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 219 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 169 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 230 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 230 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 197 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 154 bp overlap
Stat4 1 dataset
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 230 bp overlap
VENTX 2 datasets
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
Motif ES_0h ES_0h-VENTX_MA0724.1 9 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 230 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 107 bp overlap
ChIP NT2/D1 ENCFF999MII 230 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 226 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZFP42 1 dataset
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF331 1 dataset
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 209 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 188 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 230 bp overlap
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