chr5 : 62,780,993 62,781,208
215 bp 47 TFs 0 linked genes
This 215 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:62,775,993 – 62,786,208
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 79 bp overlap
CTCF 59 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 214 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 163 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 215 bp overlap
ChIP A673 ENCFF123WOM 130 bp overlap
ChIP AG04449 ENCFF248MBD 181 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF531QOI 214 bp overlap
ChIP GM23338 ENCFF772DML 98 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 211 bp overlap
ChIP H1 ENCFF764RHO 147 bp overlap
ChIP H9 ENCFF152GTF 215 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 198 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 136 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 204 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 185 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 186 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 79 bp overlap
ChIP HepG2 ENCFF127KUP 205 bp overlap
ChIP HepG2 ENCFF194VBQ 215 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 205 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 175 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 111 bp overlap
ChIP K562 ENCFF598YSU 215 bp overlap
ChIP MCF-7 ENCFF162GNE 206 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 215 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 155 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 104 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 215 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 157 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 56 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 173 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 176 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 212 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 138 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 128 bp overlap
ChIP endodermal cell ENCFF471YCZ 215 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 142 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 153 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 137 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 100 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 215 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 215 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 215 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 150 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 183 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 185 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 197 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 192 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 193 bp overlap
ChIP neural progenitor cell ENCFF420RBO 128 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 215 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 185 bp overlap
ChIP placenta ENCFF029PHY 215 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 215 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 176 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 131 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 196 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 178 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 186 bp overlap
Hmga1 2 datasets
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 201 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 91 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 108 bp overlap
ChIP K562 ENCFF128TYE 178 bp overlap
MYBL2 1 dataset
Motif DE_12h DE_12h-MYBL2_MA0777.1 15 bp overlap
NFKB1 2 datasets
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NFKB2 2 datasets
Motif DE_12h DE_12h-NFKB2_MA0778.2 11 bp overlap
Motif ES_0h ES_0h-NFKB2_MA0778.2 11 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 215 bp overlap
RAD21 11 datasets
ChIP H1 ENCFF698EWO 212 bp overlap
ChIP H1 ENCFF967OJF 215 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 215 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF360ZSW 194 bp overlap
ChIP HepG2 ENCFF906QIS 191 bp overlap
ChIP HepG2 ENCFF963UBJ 215 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 197 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 195 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 165 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 125 bp overlap
ChIP K562 ENCFF248CGR 120 bp overlap
ChIP K562 ENCFF957ORK 120 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELA 2 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif ES_0h ES_0h-RELA_MA0107.1 10 bp overlap
RELB 1 dataset
Motif DE_12h DE_12h-RELB_MA1117.2 7 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 190 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 204 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 146 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
STAG1 6 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 198 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 174 bp overlap
ChIP HepG2 ENCFF843EBZ 215 bp overlap
ChIP K-562 ENCSR153HNT.STAG1.K-562 172 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 129 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 92 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 215 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 112 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 164 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 116 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 106 bp overlap
ZNF140 2 datasets
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
Motif ES_0h ES_0h-ZNF140_MA1589.2 19 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF263 3 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 161 bp overlap
ZNF343 2 datasets
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 70 bp overlap
ChIP HepG2 ENCFF490FFQ 136 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF671 1 dataset
ChIP HEK293T GSE78099.ZNF671.HEK293T 201 bp overlap