chr1 : 90,713,707 – 90,714,753
1,046 bp 45 TFs 1 linked gene
This 1.0 kb open chromatin element is linked to ENSG00000287076 and is bound by 45 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000287076 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:90,708,707 – 90,719,753
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 140 bp overlap
BCOR 5 datasets
ChIP WA01 GSE104690.BCOR.WA01 1024 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 596 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 122 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 295 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 491 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 737 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 99 bp overlap
BRD4 6 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 280 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 215 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 593 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 235 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 279 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 72 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 93 bp overlap
CBX2 2 datasets
ChIP HEK293T GSE34774.CBX2.HEK293T 300 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 327 bp overlap
CBX7 3 datasets
ChIP hESC GSE133412.CBX7.hESC 116 bp overlap
ChIP hESC_QKO GSE133412.CBX7.hESC_QKO 107 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 110 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 270 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 176 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 345 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 206 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 162 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 409 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 177 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 367 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 142 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 249 bp overlap
ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 113 bp overlap
EZH2 46 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 483 bp overlap
ChIP GM23248 ENCFF404ZHM 558 bp overlap
ChIP GM23338 ENCFF613YON 57 bp overlap
ChIP GM23338 ENCFF613YON 434 bp overlap
ChIP GM23338 ENCFF886DXX 150 bp overlap
ChIP H1 ENCFF232NZA 1046 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 369 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 276 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 779 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 869 bp overlap
ChIP HepG2 ENCFF912EIW 623 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 205 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 326 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 536 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 245 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 549 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 145 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 97 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 863 bp overlap
ChIP T98G GSE112240.EZH2.T98G 909 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 1046 bp overlap
ChIP astrocyte ENCFF365JTP 331 bp overlap
ChIP astrocyte ENCFF365JTP 565 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 569 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 235 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 453 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 838 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 430 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 122 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 421 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 636 bp overlap
ChIP fibroblast of lung ENCFF479BAW 481 bp overlap
ChIP fibroblast of lung ENCFF479BAW 253 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 509 bp overlap
ChIP hepatocyte ENCFF552DZB 375 bp overlap
ChIP keratinocyte ENCFF070STK 326 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 69 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 98 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 380 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 342 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 1027 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 1046 bp overlap
ChIP neural progenitor cell ENCFF472NFV 1046 bp overlap
EZH2_phosphoT487 3 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 566 bp overlap
ChIP OCI-Ly7 ENCSR565XSL.EZH2_phosphoT487.OCI-Ly7 424 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 189 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 365 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
JARID2 7 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 966 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 355 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 63 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 567 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 292 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 533 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 306 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 297 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 332 bp overlap
MCM5 1 dataset
ChIP K-562 ENCSR628APV.MCM5.K-562 173 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 316 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 95 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 193 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 195 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 91 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 630 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 1046 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 129 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 313 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 203 bp overlap
REST 1 dataset
ChIP LNCaP GSE119385.REST.LNCaP 207 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 636 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 139 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 816 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 277 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 192 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 131 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 430 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 210 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 455 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 191 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 154 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 196 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 219 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 443 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 214 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 174 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 456 bp overlap
SUZ12 18 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 451 bp overlap
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 458 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 273 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 290 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 1046 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 223 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 222 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 228 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 228 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 170 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 311 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 528 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 347 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 408 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 302 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 498 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 284 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 193 bp overlap
TEAD4 1 dataset
ChIP ESC S26-ESC-d0-TEAD4-exp1 592 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 200 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 294 bp overlap
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