chr5 : 45,279,224 – 45,279,409
185 bp 55 TFs 0 linked genes
This 185 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:45,274,224 – 45,284,409
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 185 bp overlap
ChIP HCT-116 GSE57628.BRD4.HCT-116 185 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 155 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 155 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 140 bp overlap
CBX3 2 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 185 bp overlap
ChIP HCT116 ENCFF947BOL 185 bp overlap
CDK9 1 dataset
ChIP A-375_1726plus GSE128080.CDK9.A-375_1726plus 154 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 185 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 185 bp overlap
CEBPB 2 datasets
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 185 bp overlap
ChIP HCT116 ENCFF097OLY 185 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 185 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 185 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 72 bp overlap
CTNNB1 3 datasets
ChIP LS180 GSE31939.CTNNB1.LS180 168 bp overlap
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 185 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 185 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 185 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 185 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 185 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 185 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 185 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 185 bp overlap
ETV1 1 dataset
ChIP A-375 GSE80443.ETV1.A-375 185 bp overlap
FLI1 1 dataset
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 185 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 185 bp overlap
FOSL1 3 datasets
ChIP 143B GSE74230.FOSL1.143B 185 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 185 bp overlap
ChIP HCT116 ENCFF540ZXN 185 bp overlap
FOXA1 9 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 185 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 185 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 185 bp overlap
ChIP HEK293_v5_TFS GSE123618.FOXA1.HEK293_v5_TFS 66 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 185 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 115 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 173 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 185 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 185 bp overlap
FOXA2 9 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 185 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 185 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 185 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 185 bp overlap
ChIP DE DE-FOXA2-1 185 bp overlap
ChIP DE DE-FOXA2-2 185 bp overlap
ChIP PC-3_GSK GSE148982.FOXA2.PC-3_GSK 159 bp overlap
ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 185 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 175 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 185 bp overlap
ChIP DE DE-GATA4-2 185 bp overlap
ChIP foregut GSE117136.GATA4.foregut 185 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 185 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 185 bp overlap
ChIP DE DE-GATA6-2 185 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 185 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 170 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 185 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 185 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 179 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 185 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 185 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 185 bp overlap
HNF4A 2 datasets
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 185 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 185 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 185 bp overlap
JUN 10 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 185 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 185 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 185 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 185 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 185 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 185 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 185 bp overlap
ChIP H1 ENCFF621PNP 163 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 185 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 185 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 185 bp overlap
JUND 4 datasets
ChIP H1 ENCFF010YXS 185 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 185 bp overlap
ChIP HCT116 ENCFF748ZQX 185 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 121 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 185 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 185 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 172 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 185 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 185 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 185 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 185 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 185 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 185 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 185 bp overlap
ChIP hESC GSE18292.NANOG.hESC 185 bp overlap
NIPBL 5 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 185 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 185 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 185 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 159 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 175 bp overlap
NR2F2 1 dataset
ChIP HeLa GSE46237.NR2F2.HeLa 160 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 185 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 94 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 185 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 154 bp overlap
RELA 2 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 185 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 185 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 123 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 185 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 185 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 185 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 185 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 185 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 158 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 115 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 185 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 185 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 185 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 185 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 185 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 179 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 185 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 185 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 185 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 85 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 185 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 141 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 185 bp overlap
ChIP HCT116 ENCFF800LBN 185 bp overlap
STAT3 1 dataset
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 185 bp overlap
TCF4 1 dataset
ChIP LS180_125 GSE31939.TCF4.LS180_125 150 bp overlap
TCF7L2 5 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 179 bp overlap
ChIP HCT-116_C16 GSE127960.TCF7L2.HCT-116_C16 168 bp overlap
ChIP HCT-116_WT GSE127960.TCF7L2.HCT-116_WT 181 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 185 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 185 bp overlap
TEAD4 2 datasets
ChIP HCT-116 ENCSR000BVJ.TEAD4.HCT-116 162 bp overlap
ChIP HCT116 ENCFF526YYD 171 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 102 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 185 bp overlap
ZIC5 6 datasets
ChIP HCT-116_C16-CT289 GSE127960.ZIC5.HCT-116_C16-CT289 154 bp overlap
ChIP HCT-116_C18-CT289 GSE127960.ZIC5.HCT-116_C18-CT289 181 bp overlap
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 180 bp overlap
ChIP HCT-116_WT-FL290 GSE127960.ZIC5.HCT-116_WT-FL290 185 bp overlap
ChIP HCT-116_sc1 GSE127960.ZIC5.HCT-116_sc1 185 bp overlap
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 185 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 177 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 185 bp overlap
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