chr5 : 41,878,734 41,879,259
525 bp 39 TFs 2 linked genes
This 525 bp open chromatin element is linked to OXCT1 and OXCT1-AS1 and is bound by 39 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
OXCT1 8.3 kb Proximal Proximity
OXCT1-AS1 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:41,873,734 – 41,884,259
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 280 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 185 bp overlap
BRD4 1 dataset
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 121 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 240 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 222 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 124 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 508 bp overlap
ChIP DE DE-FOXA2-2 314 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP K562 ENCFF094CMK 216 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 291 bp overlap
GATA2 3 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 268 bp overlap
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 172 bp overlap
ChIP HepG2 ENCFF905PYM 286 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 525 bp overlap
ChIP DE DE-GATA4-2 525 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 470 bp overlap
ChIP foregut GSE117136.GATA4.foregut 525 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 310 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 525 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 498 bp overlap
ChIP DE DE-GATA6-2 498 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 341 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 315 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 498 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 386 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 525 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 458 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 243 bp overlap
HNF1A 6 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 135 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 165 bp overlap
ChIP Hep-G2 ENCSR800QIT.HNF1A.Hep-G2 354 bp overlap
ChIP HepG2 ENCFF352VYI 155 bp overlap
ChIP HepG2 ENCFF540TRC 324 bp overlap
ChIP NY15 GSE108150.HNF1A.NY15 375 bp overlap
HNF1B 4 datasets
ChIP H9 ERP004206.HNF1B.H9 229 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 271 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 450 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 293 bp overlap
HNRNPUL1 4 datasets
ChIP Hep-G2 ENCSR183AXJ.HNRNPUL1.Hep-G2 199 bp overlap
ChIP Hep-G2 GSE120104.HNRNPUL1.Hep-G2 236 bp overlap
ChIP HepG2 ENCFF066YCU 249 bp overlap
ChIP HepG2 ENCFF150IKP 249 bp overlap
MLLT1 5 datasets
ChIP GM12878 ENCFF995GXC 308 bp overlap
ChIP GM12878 ENCFF995GXC 495 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 360 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 207 bp overlap
ChIP K562 ENCFF074XRJ 341 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 272 bp overlap
NFIC 2 datasets
ChIP Hep-G2 GSE108514.NFIC.Hep-G2 310 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 275 bp overlap
NR2F2 1 dataset
ChIP HeLa GSE46237.NR2F2.HeLa 235 bp overlap
ONECUT1 4 datasets
ChIP H9 ERP004206.ONECUT1.H9 411 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 203 bp overlap
ChIP HepG2 ENCFF243FIR 266 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 339 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 237 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 222 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 115 bp overlap
PRDM6 4 datasets
ChIP HEK293 ENCFF283AJL 125 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 525 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 262 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 123 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 400 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 400 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 391 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 282 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 414 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 524 bp overlap
ChIP HEK293 ENCFF865LIO 525 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 525 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 380 bp overlap
ZNF518A 3 datasets
ChIP HEK293 ENCFF892ULS 407 bp overlap
ChIP HEK293 ENCFF892ULS 207 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 367 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 449 bp overlap
ChIP HepG2 ENCFF331VPZ 168 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 143 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 235 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 157 bp overlap