chr5 : 16,930,520 – 16,930,855
335 bp 45 TFs 0 linked genes
This 335 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:16,925,520 – 16,935,855
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 13 datasets
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 123 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 70 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 335 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 146 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 99 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 335 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 335 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 335 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 180 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 72 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 126 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 127 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 217 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 212 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 335 bp overlap
BRD4 1 dataset
ChIP HEK293T GSE39579.BRD4.HEK293T 206 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 201 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 335 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 160 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_45 GSE62428.CHD8.T-47D_R5020_45 298 bp overlap
ERG 3 datasets
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 110 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 245 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 130 bp overlap
ESR1 5 datasets
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 335 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 335 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 169 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 234 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 181 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 150 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 141 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 107 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 266 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 301 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 173 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 292 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 132 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 91 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 211 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 143 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 204 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 106 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 335 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 335 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 192 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 225 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 137 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 230 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 141 bp overlap
NR3C1 4 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 151 bp overlap
ChIP A-549 ENCSR000BHF.NR3C1.A-549 89 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 234 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 335 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 335 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 335 bp overlap
PGR 9 datasets
ChIP T-47D GSE31129.PGR.T-47D 335 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 225 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 311 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 335 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 335 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 335 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 335 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 335 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 335 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 137 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 109 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 335 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 335 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 275 bp overlap
PRDM14 4 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 204 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 335 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 295 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 248 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 71 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 210 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 191 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 131 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 179 bp overlap
SMARCC1 4 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 335 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 245 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 193 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 335 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 168 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 233 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 196 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 335 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 335 bp overlap
STAG1 1 dataset
ChIP HCAEC GSE101921.STAG1.HCAEC 90 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 218 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 123 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 122 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 247 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 127 bp overlap
ZKSCAN1 1 dataset
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 163 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 77 bp overlap
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