chr4 : 185,480,181 185,480,728
547 bp 39 TFs 2 linked genes
This 547 bp open chromatin element is linked to ENSG00000249679 and CCDC110 and is bound by 39 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000249679 8.7 kb Proximal Proximity
CCDC110 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:185,475,181 – 185,485,728
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
AHR 1 dataset
ChIP GM01310_3MC GSE116632.AHR.GM01310_3MC 145 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 504 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 259 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 277 bp overlap
BRD2 1 dataset
ChIP MM1-S GSE43743.BRD2.MM1-S 192 bp overlap
BRD4 5 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 259 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 392 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 373 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 176 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 365 bp overlap
CBFB 1 dataset
ChIP GM12878 ENCFF056JUS 306 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 340 bp overlap
CEBPB 1 dataset
ChIP H1 ENCFF871PTR 237 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 159 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 136 bp overlap
ChIP BLaER1 ENCFF274GAT 289 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 354 bp overlap
EP300 2 datasets
ChIP GM12878 ENCSR000BHB.EP300.GM12878 117 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 250 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 255 bp overlap
EZH2 1 dataset
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 166 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 504 bp overlap
ChIP DE DE-FOXA2-2 454 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 446 bp overlap
ChIP DE DE-GATA4-2 403 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 442 bp overlap
ChIP DE DE-GATA6-2 391 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 367 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 368 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 248 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 384 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 328 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 286 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 292 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 247 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 257 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 168 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 390 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 320 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 184 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 443 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 343 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 321 bp overlap
ChIP hESC GSE20650.NANOG.hESC 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 181 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 387 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 320 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 289 bp overlap
ChIP K562 ENCFF740YLK 237 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 161 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 337 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 285 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 339 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 284 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 377 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 544 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 217 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 144 bp overlap
STAT3 1 dataset
ChIP OCI-Ly7 GSE50723.STAT3.OCI-Ly7 285 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 257 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 148 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 391 bp overlap
ChIP Ramos GSE139810.TCF3.Ramos 63 bp overlap
ZNF496 1 dataset
ChIP HEK293T GSE78099.ZNF496.HEK293T 194 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap