chr1 : 85,195,726 85,196,020
294 bp 44 TFs 1 linked gene
This 294 bp open chromatin element is linked to SYDE2 and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SYDE2 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:85,190,726 – 85,201,020
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 185 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 264 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 249 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 193 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF175DFS 245 bp overlap
CRX 4 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 265 bp overlap
ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 203 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 294 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 294 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 232 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 286 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 294 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 102 bp overlap
EP300 1 dataset
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 126 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 107 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 267 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 122 bp overlap
ESRRA 3 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 294 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 294 bp overlap
ChIP K562 ENCFF968PEP 211 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 294 bp overlap
EZH2 1 dataset
ChIP KG-1_shPLZF GSE109619.EZH2.KG-1_shPLZF 294 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 260 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 294 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 294 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 265 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 218 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 127 bp overlap
ChIP HepG2 ENCFF854JLR 216 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 242 bp overlap
ChIP K562 ENCFF055GAZ 294 bp overlap
ChIP K562 ENCFF317JJX 294 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 235 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 294 bp overlap
MEN1 2 datasets
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 294 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 233 bp overlap
NR5A1 2 datasets
ChIP Hep-G2 ENCSR310OZS.NR5A1.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF970YZO 258 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 294 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 294 bp overlap
POLR2A 1 dataset
ChIP esophagus muscularis mucosa ENCFF432ZCY 294 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 244 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 87 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 104 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 294 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 242 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 238 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 202 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 265 bp overlap
ZMYM3 2 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 206 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 173 bp overlap
ZNF143 2 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 160 bp overlap
ChIP HEK293T GSE39263.ZNF143.HEK293T 284 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 294 bp overlap
ZNF341 1 dataset
ChIP HIES_T-cell_anti-CD3_anti-CD28 GSE113194.ZNF341.HIES_T-cell_anti-CD3_anti-CD28 159 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 267 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 165 bp overlap
ZNF558 1 dataset
ChIP HEK293T GSE78099.ZNF558.HEK293T 98 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 182 bp overlap