chr1 : 80,535,048 – 80,535,188
140 bp 48 TFs 0 linked genes
This 140 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:80,530,048 – 80,540,188
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 102 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 120 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 140 bp overlap
BRD4 2 datasets
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 140 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 140 bp overlap
CBX3 2 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 119 bp overlap
ChIP HCT116 ENCFF947BOL 140 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 140 bp overlap
CEBPB 1 dataset
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 140 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 140 bp overlap
CTCF 32 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 134 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 140 bp overlap
ChIP A549 ENCFF434LUY 123 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 138 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 117 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 140 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 140 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 140 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 140 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 140 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 83 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 104 bp overlap
ChIP HEK293T GSE103651.CTCF.HEK293T 52 bp overlap
ChIP HeLa-S3 ENCFF565UFR 137 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 120 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 140 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 110 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 134 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 138 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 140 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 140 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 140 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 130 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 140 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 97 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 140 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 123 bp overlap
ChIP chondrocyte ENCFF134ORZ 140 bp overlap
ChIP endodermal cell ENCFF471YCZ 140 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 140 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 113 bp overlap
DAXX 2 datasets
ChIP PC-3 GSE68647.DAXX.PC-3 133 bp overlap
ChIP PC-3_DAXX GSE68647.DAXX.PC-3_DAXX 121 bp overlap
ESR1 1 dataset
Motif ES_0h ES_0h-ESR1_MA0112.4 15 bp overlap
ESR2 1 dataset
Motif ES_0h ES_0h-ESR2_MA0258.2 15 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 138 bp overlap
FOS 7 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 140 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 88 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 140 bp overlap
ChIP MCF-7 ENCFF282FWZ 140 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 140 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 140 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 75 bp overlap
FOSL1 4 datasets
ChIP BT-549 GSE46166.FOSL1.BT-549 140 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 127 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 140 bp overlap
ChIP HCT116 ENCFF540ZXN 126 bp overlap
FOSL2 8 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 140 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 140 bp overlap
ChIP A549 ENCFF195CES 140 bp overlap
ChIP A549 ENCFF651PDH 140 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 137 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 140 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 140 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 124 bp overlap
FOXA1 1 dataset
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 105 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 119 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 140 bp overlap
HNF4A 3 datasets
ChIP HCT-116 GSE62890.HNF4A.HCT-116 140 bp overlap
ChIP HCT-116_TCF4 GSE62890.HNF4A.HCT-116_TCF4 140 bp overlap
ChIP HCT-116_TCF4_DOX GSE62890.HNF4A.HCT-116_TCF4_DOX 140 bp overlap
HOXB4 1 dataset
Motif ES_0h ES_0h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif ES_0h ES_0h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif ES_0h ES_0h-HOXD4_MA1507.2 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 140 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 140 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 129 bp overlap
JUNB 3 datasets
ChIP A549 ENCFF251BPG 140 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 140 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 125 bp overlap
JUND 2 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 140 bp overlap
ChIP HCT116 ENCFF748ZQX 104 bp overlap
Lhx3 1 dataset
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
NFIL3 1 dataset
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 140 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 140 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 71 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 136 bp overlap
PHOX2A 1 dataset
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
POLR2A 1 dataset
ChIP HCT116 ENCFF508RDJ 140 bp overlap
PPARG 1 dataset
Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap
RAD21 10 datasets
ChIP H1 ENCFF698EWO 140 bp overlap
ChIP H1 ENCFF967OJF 140 bp overlap
ChIP HCT116 ENCFF568PEO 94 bp overlap
ChIP HeLa-S3 ENCFF775CHI 140 bp overlap
ChIP MCF-7 ENCFF694KOM 140 bp overlap
ChIP MCF-7 ENCFF724VCQ 140 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 130 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 140 bp overlap
Rhox11 1 dataset
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SIN3A 1 dataset
ChIP HCT-116 ENCSR000BSG.SIN3A.HCT-116 60 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 140 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 72 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 100 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 87 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 72 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 52 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 85 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 90 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 71 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 106 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 140 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 140 bp overlap
SMARCC1 1 dataset
ChIP HCT-116 GSE71510.SMARCC1.HCT-116 140 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 140 bp overlap
ChIP HCT116 ENCFF800LBN 140 bp overlap
SRF 2 datasets
ChIP HCT-116 ENCSR000BSC.SRF.HCT-116 67 bp overlap
ChIP HCT116 ENCFF497JOF 140 bp overlap
STAG1 3 datasets
ChIP HeLa GSE126990.STAG1.HeLa 140 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 140 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 126 bp overlap
TCF7L2 6 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 140 bp overlap
ChIP HCT-116_C16 GSE127960.TCF7L2.HCT-116_C16 118 bp overlap
ChIP HCT-116_C18 GSE127960.TCF7L2.HCT-116_C18 119 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 136 bp overlap
ChIP HCT116 ENCFF038POZ 140 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 140 bp overlap
TEAD4 2 datasets
ChIP HCT-116 ENCSR000BVJ.TEAD4.HCT-116 140 bp overlap
ChIP HCT116 ENCFF526YYD 140 bp overlap
TEF 1 dataset
Motif ES_0h ES_0h-TEF_MA0843.2 10 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 140 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 73 bp overlap
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