chr4 : 80,188,776 80,189,299
523 bp 44 TFs 2 linked genes
This 523 bp open chromatin element is linked to PRDM8-AS1 and PRDM8 and is bound by 44 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
PRDM8-AS1 869 bp At TSS Proximity
PRDM8 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:80,183,776 – 80,194,299
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 3 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 227 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 419 bp overlap
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 269 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 142 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 297 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 321 bp overlap
BRD4 7 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 206 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 403 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 293 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 523 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 248 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 401 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 266 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 372 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CTCF 1 dataset
ChIP erythroid GSE67783.CTCF.erythroid 193 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 264 bp overlap
ChIP BLaER1 ENCFF335XTP 231 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 110 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 233 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 136 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 235 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 209 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 282 bp overlap
ESR1 1 dataset
ChIP Ishikawa GSE99905.ESR1.Ishikawa 250 bp overlap
EZH2 17 datasets
ChIP GM23338 ENCFF613YON 523 bp overlap
ChIP GM23338 ENCFF886DXX 523 bp overlap
ChIP H1 ENCFF232NZA 523 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 523 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 125 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 194 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 173 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 523 bp overlap
ChIP astrocyte ENCFF365JTP 512 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 523 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 269 bp overlap
ChIP hESC GSE113817.EZH2.hESC 523 bp overlap
ChIP hepatocyte ENCFF552DZB 166 bp overlap
ChIP keratinocyte ENCFF070STK 523 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 493 bp overlap
ChIP neural progenitor cell ENCFF018MKA 523 bp overlap
ChIP neural progenitor cell ENCFF472NFV 523 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 251 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 262 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 383 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 523 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 108 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 341 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 251 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 199 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 421 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 369 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 353 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 243 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 171 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 131 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 354 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 353 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 430 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 308 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 523 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 379 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 490 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 262 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 374 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 263 bp overlap
SRSF3 1 dataset
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 309 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 270 bp overlap
SUZ12 7 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 145 bp overlap
ChIP H1 ENCFF881NFR 523 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 241 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 523 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.SUZ12.hiPSC_WTa_RNase-neg 293 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.SUZ12.hiPSC_WTb_RNase-neg 331 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 303 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 144 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 171 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 130 bp overlap
ChIP HCT-116 GSE72622.TRIM28.HCT-116 344 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 523 bp overlap
ChIP K562 ENCFF875HLX 174 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 370 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 523 bp overlap