chr4 : 73,445,486 73,445,681
195 bp 48 TFs 1 linked gene
This 195 bp open chromatin element is linked to AFP and is bound by 48 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
AFP 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:73,440,486 – 73,450,681
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 182 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF576ERP 157 bp overlap
CTCF 3 datasets
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 123 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 166 bp overlap
ChIP T-47D_D538G GSE148277.CTCF.T-47D_D538G 67 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 159 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 162 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 152 bp overlap
ChIP MCF-7_LY2_ETOH GSE54592.ESR1.MCF-7_LY2_ETOH 156 bp overlap
ChIP MCF-7_shTEAD4 GSE125594.ESR1.MCF-7_shTEAD4 163 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 157 bp overlap
FOXO3 1 dataset
ChIP Hep-G2 GSE97661.FOXO3.Hep-G2 156 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 107 bp overlap
GATA1 3 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 195 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 153 bp overlap
GATA2 2 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 195 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 195 bp overlap
ChIP DE DE-GATA4-2 195 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 195 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 195 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 195 bp overlap
ChIP DE DE-GATA6-2 195 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 195 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 195 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 195 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 195 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 195 bp overlap
ChIP foregut GSE117136.GATA6.foregut 195 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 195 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 195 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 193 bp overlap
GATAD2B 1 dataset
ChIP HepG2 ENCFF829IBY 91 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HNRNPL 1 dataset
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 105 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 195 bp overlap
ChIP Hep-G2 GSE107730.INO80.Hep-G2 68 bp overlap
ISL2 1 dataset
ChIP HepG2 ENCFF742RIP 149 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 123 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 91 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 195 bp overlap
ChIP Hep-G2 ENCSR000BRO.MYBL2.Hep-G2 125 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NFIC 1 dataset
ChIP Hep-G2 ENCSR000BQX.NFIC.Hep-G2 195 bp overlap
NR1D2 1 dataset
Motif DE_60h DE_60h-NR1D2_MA1532.2 15 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
PHF8 2 datasets
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 153 bp overlap
ChIP HepG2 ENCFF065NWR 195 bp overlap
POLR2A 2 datasets
ChIP HepG2 ENCFF718XAJ 195 bp overlap
ChIP HepG2 ENCFF736SLT 195 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 195 bp overlap
PRDM15 1 dataset
ChIP HepG2 ENCFF259LUZ 72 bp overlap
RBFOX2 3 datasets
ChIP HepG2 ENCFF554DMZ 195 bp overlap
ChIP HepG2 ENCFF554DMZ 195 bp overlap
ChIP HepG2 ENCFF939HTZ 195 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap
RORB 1 dataset
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 187 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 176 bp overlap
SRSF4 2 datasets
ChIP Hep-G2 ENCSR696MBC.SRSF4.Hep-G2 192 bp overlap
ChIP Hep-G2 GSE120104.SRSF4.Hep-G2 195 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 195 bp overlap
TAF1 2 datasets
ChIP GM12891 ENCFF254YPA 195 bp overlap
ChIP GM12891 ENCFF254YPA 51 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 194 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2_AC_R259-2-2C3 GSE97661.ZMYM3.Hep-G2_AC_R259-2-2C3 132 bp overlap
ZNF124 1 dataset
ChIP HepG2 ENCFF764EFJ 195 bp overlap
ZNF528 1 dataset
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
ZSCAN31 1 dataset
ChIP HepG2 ENCFF066FRL 195 bp overlap