chr1 : 54,997,481 54,997,916
435 bp 43 TFs 1 linked gene
This 435 bp open chromatin element is linked to BSND and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BSND 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:54,992,481 – 55,002,916
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 230 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 346 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 285 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 158 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 103 bp overlap
CTCF 7 datasets
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 205 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 263 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 244 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 95 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 214 bp overlap
ChIP endodermal cell ENCFF471YCZ 349 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 236 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 232 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 199 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 249 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 176 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 132 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 197 bp overlap
EZH2 21 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 256 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 181 bp overlap
ChIP H1 ENCFF232NZA 404 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 271 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 278 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 345 bp overlap
ChIP T98G GSE112240.EZH2.T98G 244 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 425 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 186 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 81 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 282 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 258 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 115 bp overlap
ChIP fibroblast of lung ENCFF479BAW 270 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 330 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 389 bp overlap
ChIP hepatocyte ENCFF552DZB 137 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 307 bp overlap
ChIP neural progenitor cell ENCFF018MKA 327 bp overlap
ChIP neural progenitor cell ENCFF018MKA 435 bp overlap
ChIP neural progenitor cell ENCFF472NFV 97 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 376 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 304 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 264 bp overlap
JUN 4 datasets
ChIP 786-O GSE86092.JUN.786-O 257 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 339 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 206 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 394 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 186 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 214 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 98 bp overlap
NANOG 4 datasets
ChIP H1 ENCFF747ZPQ 198 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 369 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 175 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 174 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 159 bp overlap
ChIP H1 ENCFF833NJP 256 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 333 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 343 bp overlap
RELA 2 datasets
ChIP 786-O GSE86092.RELA.786-O 226 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 172 bp overlap
RNF2 1 dataset
ChIP WA01 ENCSR784VUY.RNF2.WA01 225 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 245 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 309 bp overlap
SIN3A 1 dataset
ChIP H1 ENCFF042ZSL 368 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 216 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 133 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 295 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 337 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 114 bp overlap
SUZ12 3 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 188 bp overlap
ChIP H1 ENCFF881NFR 182 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 308 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 226 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 435 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 390 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 435 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 349 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 299 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 254 bp overlap