chr2 : 214,107,805 – 214,108,253

448 bp 67 TFs 0 linked genes

This 448 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

67 transcription factors

ARGFX 2 datasets

Motif DE_12h DE_12h-ARGFX_MA1463.2 8 bp overlap

Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap

Arx 2 datasets

Motif DE_12h DE_12h-Arx_MA0874.2 10 bp overlap

Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap

BARX1 2 datasets

Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BCL6 1 dataset

Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap

BSX 2 datasets

Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CEBPA 2 datasets

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

Motif ES_0h ES_0h-CEBPA_MA0102.5 10 bp overlap

CTCF 1 dataset

ChIP NB4 ENCSR000DWN.CTCF.NB4 59 bp overlap

DLX1 2 datasets

Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx2 2 datasets

Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap

Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap

Dlx3 2 datasets

Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

Dlx5 2 datasets

Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap

Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap

GATA3 1 dataset

ChIP Kelly GSE94822.GATA3.Kelly 197 bp overlap

GATA6 2 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 292 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 332 bp overlap

GBX2 2 datasets

Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

HOXC12 1 dataset

Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap

Hand1 1 dataset

Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap

ISL1 1 dataset

ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 152 bp overlap

ISL2 2 datasets

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap

LBX2 2 datasets

Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

MEF2A 1 dataset

Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap

MEF2B 1 dataset

Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap

MEF2C 1 dataset

Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap

MEF2D 1 dataset

Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap

MSC 1 dataset

Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap

MSX1 2 datasets

Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

Msx3 2 datasets

Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NANOG 5 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 182 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 310 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 183 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 226 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 297 bp overlap

NFYB 2 datasets

Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap

Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap

Nkx3-1 2 datasets

Motif DE_12h DE_12h-Nkx3-1_MA0124.3 7 bp overlap

Motif ES_0h ES_0h-Nkx3-1_MA0124.3 7 bp overlap

Nkx3-2 2 datasets

Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap

Motif ES_0h ES_0h-Nkx3-2_MA0122.4 10 bp overlap

Nobox 2 datasets

Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

POU1F1 2 datasets

Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU3F1 2 datasets

Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap

Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap

Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap

POU3F3 2 datasets

Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap

Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 319 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 448 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 278 bp overlap

POU5F1B 2 datasets

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Plagl1 2 datasets

Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap

Motif ES_0h ES_0h-Plagl1_MA1615.2 8 bp overlap

RAX 2 datasets

Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

Rhox11 2 datasets

Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap

SATB1 1 dataset

Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap

SMARCC1 1 dataset

ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 171 bp overlap

SOX21 1 dataset

Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap

Sox1 1 dataset

Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap

TFAP2A 4 datasets

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap

Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap

ChIP WA09 GSE105081.TFAP2A.WA09 215 bp overlap

TFAP2B 4 datasets

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap

Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap

ChIP SK-N-SH ENCFF869XXQ 315 bp overlap

TFAP2C 4 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap

Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 305 bp overlap

TFAP2E 1 dataset

Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap

Tcf21 1 dataset

Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap

ZNF140 1 dataset

Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap

ZNF35 1 dataset

Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap

ZNF410 1 dataset

Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap

ZNF418 2 datasets

Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap

Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap

ZNF547 1 dataset

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

ZNF677 1 dataset

Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap

ZSCAN29 1 dataset

Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap