chr2 : 193,895,147 193,895,570
423 bp 40 TFs 0 linked genes
This 423 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:193,890,147 – 193,900,570
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 4 datasets
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 423 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 71 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 288 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
BATF3 2 datasets
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 212 bp overlap
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 293 bp overlap
BRD4 1 dataset
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 283 bp overlap
CEBPA 2 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 243 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 267 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 230 bp overlap
CTNNB1 2 datasets
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 195 bp overlap
ChIP hiPSC_TT-neg_D2 GSE132532.CTNNB1.hiPSC_TT-neg_D2 285 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 352 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 125 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 257 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 208 bp overlap
ERG 2 datasets
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 310 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 136 bp overlap
ETS1 1 dataset
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 271 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 223 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 161 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 156 bp overlap
ChIP SEM GSE117864.FLI1.SEM 213 bp overlap
ChIP UAE GSE23730.FLI1.UAE 212 bp overlap
GABPA 2 datasets
ChIP VCaP GSE49091.GABPA.VCaP 197 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 239 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 423 bp overlap
HOXB13 2 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 69 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 156 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 251 bp overlap
ChIP BC-3 GSE132777.IRF4.BC-3 255 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 295 bp overlap
JUND 1 dataset
ChIP Kasumi-1_ctrl GSE117105.JUND.Kasumi-1_ctrl 121 bp overlap
KMT2A 2 datasets
ChIP RS4-11 GSE38403.KMT2A.RS4-11 54 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 270 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 278 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 250 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 247 bp overlap
ChIP HepG2 ENCFF701PYP 158 bp overlap
MYB 2 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 181 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 423 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 192 bp overlap
MYCN 4 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 236 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 240 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 128 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 152 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 119 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 150 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 355 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 294 bp overlap
RELA 1 dataset
ChIP L1236 GSE63736.RELA.L1236 230 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 423 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 423 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 417 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 423 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 236 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 423 bp overlap
SPI1 2 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 203 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 321 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 187 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 203 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 185 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 149 bp overlap