chr2 : 170,020,896 – 170,021,733
837 bp 50 TFs 0 linked genes
This 837 bp open chromatin element has no linked target genes and is bound by 50 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:170,015,896 – 170,026,733
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 127 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 231 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 172 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 173 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 175 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 216 bp overlap
ChIP K562 ENCFF938UXQ 162 bp overlap
ARNT2 1 dataset
Motif DE_48h DE_48h-ARNT2_MA1464.2 8 bp overlap
ARNT::HIF1A 1 dataset
Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap
Arnt 1 dataset
Motif DE_48h DE_48h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_48h DE_48h-Arntl_MA0603.2 8 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 198 bp overlap
ChIP K562 ENCFF673OEZ 182 bp overlap
CCNT2 1 dataset
ChIP K-562 ENCSR000DOA.CCNT2.K-562 169 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 136 bp overlap
DMRTA2 1 dataset
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 185 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 273 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 124 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 510 bp overlap
ChIP DE DE-FOXA2-2 453 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 191 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 250 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 177 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 113 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 258 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 146 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 163 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 186 bp overlap
ChIP K562 ENCFF094CMK 213 bp overlap
GATA2 5 datasets
ChIP K562 ENCFF544PCK 176 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 209 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 200 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 165 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 149 bp overlap
GATA3 5 datasets
ChIP BE2C GSE65664.GATA3.BE2C 135 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 174 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 168 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 150 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 174 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 166 bp overlap
ChIP DE DE-GATA4-1 837 bp overlap
ChIP DE DE-GATA4-2 837 bp overlap
ChIP foregut GSE117136.GATA4.foregut 257 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 287 bp overlap
GATA6 12 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 127 bp overlap
ChIP DE DE-GATA6-1 837 bp overlap
ChIP DE DE-GATA6-2 837 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 458 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 837 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 281 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 837 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 538 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 240 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 418 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 412 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 167 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 191 bp overlap
ChIP K562 ENCFF968WBH 308 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 251 bp overlap
JUN 1 dataset
ChIP K-562 ENCSR000FAH.JUN.K-562 90 bp overlap
KDM1A 3 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 184 bp overlap
ChIP K562 ENCFF128TYE 293 bp overlap
ChIP K562 ENCFF133OLU 287 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 222 bp overlap
MAX 1 dataset
Motif DE_48h DE_48h-MAX_MA0058.4 6 bp overlap
MITF 2 datasets
ChIP K-562 ENCSR797SWM.MITF.K-562 142 bp overlap
ChIP K562 ENCFF731XJJ 199 bp overlap
MLX 1 dataset
Motif DE_48h DE_48h-MLX_MA0663.1 10 bp overlap
MNT 1 dataset
Motif DE_48h DE_48h-MNT_MA0825.2 6 bp overlap
MYC 1 dataset
Motif DE_48h DE_48h-MYC_MA0147.4 8 bp overlap
Mlxip 1 dataset
Motif DE_48h DE_48h-Mlxip_MA0622.2 6 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 312 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 140 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 553 bp overlap
RBM22 1 dataset
ChIP K-562 GSE120104.RBM22.K-562 235 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 225 bp overlap
RUNX3 1 dataset
Motif DE_48h DE_48h-RUNX3_MA0684.3 8 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 446 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 248 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 324 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 837 bp overlap
SMARCA4 1 dataset
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 132 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 170 bp overlap
SOX17_M 2 datasets
ChIP DE_D2 DED2-SOX17-M_Batch_II 202 bp overlap
ChIP DE_D2 DED2-SOX17-M_Batch_II 291 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 185 bp overlap
STAT5A 1 dataset
ChIP K-562 ENCSR000BRR.STAT5A.K-562 123 bp overlap
TAL1 10 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 184 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 146 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 190 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 152 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 150 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 172 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 154 bp overlap
ChIP K562 ENCFF620GMX 279 bp overlap
ChIP K562 ENCFF661CCK 234 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 158 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 107 bp overlap
TFE3 1 dataset
Motif DE_48h DE_48h-TFE3_MA0831.3 10 bp overlap
USF2 1 dataset
Motif DE_48h DE_48h-USF2_MA0526.5 10 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 242 bp overlap
ChIP K562 ENCFF795CMH 309 bp overlap
ZNF585B 2 datasets
ChIP HEK293 ENCFF657XIZ 226 bp overlap
ChIP HEK293 ENCSR011XCI.ZNF585B.HEK293 240 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF505NFV 529 bp overlap
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