chr2 : 38,079,227 – 38,079,548
321 bp 48 TFs 2 linked genes
This 321 bp open chromatin element is linked to CYP1B1-AS1 and CYP1B1 and is bound by 48 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CYP1B1-AS1 4.4 kb Proximal Proximity
CYP1B1 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:38,074,227 – 38,084,548
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 321 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 183 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 74 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 291 bp overlap
BRD4 4 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 145 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 108 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 194 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 199 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 220 bp overlap
ChIP K562 ENCFF673OEZ 278 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 157 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 131 bp overlap
CLOCK 1 dataset
ChIP BA40_0 GSE96659.CLOCK.BA40_0 126 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 250 bp overlap
CTCF 2 datasets
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 129 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 98 bp overlap
ERG 7 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 174 bp overlap
ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 219 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 271 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 207 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 141 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 180 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 167 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 56 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 56 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 321 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 321 bp overlap
ChIP K562 ENCFF455MKD 321 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 273 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 130 bp overlap
ChIP DE DE-FOXA2-1 321 bp overlap
ChIP DE DE-FOXA2-2 114 bp overlap
FOXL2 2 datasets
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 122 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 242 bp overlap
GATA1 15 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 217 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 247 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 195 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 249 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 316 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 134 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 227 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 183 bp overlap
ChIP erythroblast ENCFF867JAR 321 bp overlap
ChIP erythroblast ENCFF867JAR 321 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 321 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 291 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 165 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 264 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 191 bp overlap
GATA2 8 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 241 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 151 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 89 bp overlap
ChIP K562 ENCFF544PCK 156 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 321 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 257 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 318 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 239 bp overlap
GATA3 1 dataset
ChIP T-47D GSE51274.GATA3.T-47D 108 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 200 bp overlap
ChIP DE DE-GATA4-1 321 bp overlap
ChIP DE DE-GATA4-2 321 bp overlap
ChIP foregut GSE117136.GATA4.foregut 321 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 321 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 321 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 178 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 106 bp overlap
ChIP DE DE-GATA6-1 321 bp overlap
ChIP DE DE-GATA6-2 321 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 321 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 321 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 321 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 321 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 193 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 161 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 321 bp overlap
ChIP foregut GSE117136.GATA6.foregut 321 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 269 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 321 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 321 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 176 bp overlap
GFI1B 4 datasets
ChIP CD34 GSE52924.GFI1B.CD34 116 bp overlap
ChIP K-562 ENCSR509GDT.GFI1B.K-562 91 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 162 bp overlap
ChIP SET-2 GSE121424.GFI1B.SET-2 272 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 191 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 156 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 146 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 137 bp overlap
KDM1A 3 datasets
ChIP K-562 GSE117944.KDM1A.K-562 145 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 84 bp overlap
ChIP SET-2 GSE121424.KDM1A.SET-2 207 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 66 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 168 bp overlap
LYL1 1 dataset
ChIP NB4 GSE63484.LYL1.NB4 158 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR914NEI.MTA3.K-562 164 bp overlap
MYB 1 dataset
ChIP PF-382 GSE94000.MYB.PF-382 164 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 56 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 135 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 252 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 210 bp overlap
RELA 3 datasets
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 183 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 119 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 122 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 315 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 228 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 321 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 262 bp overlap
SMARCA4 1 dataset
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 135 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 229 bp overlap
SPI1 3 datasets
ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 127 bp overlap
ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 120 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 111 bp overlap
STAT1 1 dataset
ChIP SET-2_cortistatin-A GSE100566.STAT1.SET-2_cortistatin-A 157 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 241 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 321 bp overlap
TAL1 7 datasets
ChIP CD34 GSE52924.TAL1.CD34 194 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 92 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 130 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 159 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 133 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 138 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 166 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 70 bp overlap
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