chrX : 111,511,517 – 111,511,776
259 bp 48 TFs 1 linked gene
This 259 bp open chromatin element is linked to SERTM2 and is bound by 48 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SERTM2 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:111,506,517 – 111,516,776
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
48 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 107 bp overlap
BRD4 4 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 169 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 194 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 228 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 186 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 191 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 153 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 218 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 175 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 234 bp overlap
FOS 2 datasets
ChIP MV4-11_SHFLT3 GSE64862.FOS.MV4-11_SHFLT3 162 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 118 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 245 bp overlap
ChIP K562 ENCFF455MKD 259 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
GATA1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 177 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 135 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 189 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 259 bp overlap
GATA3 1 dataset
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
GATA4 9 datasets
ChIP G296S GSE85628.GATA4.G296S 191 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 191 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 223 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 223 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 251 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 259 bp overlap
ChIP foregut GSE117136.GATA4.foregut 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 259 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 259 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 259 bp overlap
ChIP DE DE-GATA6-2 246 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 244 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 238 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 248 bp overlap
ChIP H9 ERP004206.GATA6.H9 219 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 259 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
ChIP foregut GSE117136.GATA6.foregut 259 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 249 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 259 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 259 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 259 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GFI1B 1 dataset
ChIP SET-2 GSE121424.GFI1B.SET-2 198 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 259 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 82 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 195 bp overlap
JARID2 1 dataset
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 59 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 199 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 170 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 1 dataset
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 140 bp overlap
MYB 2 datasets
ChIP Loucy GSE94000.MYB.Loucy 249 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 170 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 114 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 122 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 228 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 216 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 259 bp overlap
POLR2A 2 datasets
ChIP uterus ENCFF208ADI 259 bp overlap
ChIP uterus ENCFF208ADI 113 bp overlap
POU2F2 1 dataset
ChIP BJAB_BIRA_T223A GSE79480.POU2F2.BJAB_BIRA_T223A 156 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 145 bp overlap
REST 1 dataset
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 144 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR076YPO.RNF2.K-562 186 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 242 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 194 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 215 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 236 bp overlap
SPI1 36 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 214 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 244 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 176 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 151 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 230 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 167 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 191 bp overlap
ChIP GM12878 ENCFF134LCP 189 bp overlap
ChIP GM12891 ENCFF563IUT 150 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 204 bp overlap
ChIP HL-60 ENCFF645GBT 198 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 220 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 194 bp overlap
ChIP K-562 GSE74999.SPI1.K-562 156 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 245 bp overlap
ChIP K-562_SAHA GSE74999.SPI1.K-562_SAHA 177 bp overlap
ChIP K562 ENCFF410ORC 164 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 188 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 214 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 196 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 202 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 193 bp overlap
ChIP OCI-Ly10 GSE56857.SPI1.OCI-Ly10 181 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPI1.OCI-Ly3_SHCTR 163 bp overlap
ChIP RS4-11 GSE71616.SPI1.RS4-11 201 bp overlap
ChIP RS4-11_DEX GSE71616.SPI1.RS4-11_DEX 188 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 154 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 177 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 222 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 184 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 189 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 164 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 149 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 133 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 128 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 162 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 205 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 259 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 259 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 213 bp overlap
STAT3 3 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 148 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 146 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 236 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 194 bp overlap
TAF1 1 dataset
ChIP liver ENCSR016BMM.TAF1.liver 186 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 158 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
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