chr18 : 34,637,200 – 34,637,691

491 bp 60 TFs 0 linked genes

This 491 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

60 transcription factors

AR 1 dataset

ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 128 bp overlap

BRD4 1 dataset

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 218 bp overlap

CEBPB 2 datasets

ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 191 bp overlap

ChIP HeLa-S3 ENCFF722WEG 58 bp overlap

CTCFL 1 dataset

Motif DE_36h DE_36h-CTCFL_MA1102.3 8 bp overlap

EHF 1 dataset

Motif DE_36h DE_36h-EHF_MA0598.4 9 bp overlap

ELF3 1 dataset

Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 197 bp overlap

ChIP hESC GSE26097.EOMES.hESC 138 bp overlap

ESR1 1 dataset

ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 81 bp overlap

ETV2 1 dataset

Motif DE_36h DE_36h-ETV2_MA0762.2 9 bp overlap

ETV7 1 dataset

Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap

Erg 1 dataset

Motif DE_36h DE_36h-Erg_MA0474.4 10 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 191 bp overlap

FOXA1 11 datasets

ChIP 22Rv1 GSE96652.FOXA1.22Rv1 229 bp overlap

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 233 bp overlap

ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 266 bp overlap

ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 139 bp overlap

ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 416 bp overlap

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 336 bp overlap

ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 258 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 166 bp overlap

ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 456 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 197 bp overlap

ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 385 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 438 bp overlap

ChIP DE DE-FOXA2-2 491 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 285 bp overlap

GABPA 1 dataset

Motif DE_36h DE_36h-GABPA_MA0062.4 10 bp overlap

GATA2 1 dataset

ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 180 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 384 bp overlap

ChIP DE DE-GATA4-2 349 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 361 bp overlap

GATA5 1 dataset

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-2 476 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 491 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 476 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 423 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 367 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 490 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 491 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 385 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_36h DE_36h-Hand1Tcf3_MA0092.2 9 bp overlap

Hmx1 1 dataset

Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap

INSM1 1 dataset

Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 309 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

NCOR2 1 dataset

ChIP LS180_125 GSE39277.NCOR2.LS180_125 147 bp overlap

NKX2-2 1 dataset

Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap

NKX2-3 1 dataset

Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap

NKX2-8 1 dataset

Motif DE_36h DE_36h-NKX2-8_MA0673.2 8 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 229 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_36h DE_36h-NR1H4RXRA_MA1146.2 13 bp overlap

NR2F1 1 dataset

Motif DE_36h DE_36h-NR2F1_MA1538.1 15 bp overlap

NR2F6 1 dataset

Motif DE_36h DE_36h-NR2F6_MA1539.1 15 bp overlap

NR4A2::RXRA 1 dataset

Motif DE_36h DE_36h-NR4A2RXRA_MA1147.2 13 bp overlap

Nkx3-2 1 dataset

Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 112 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 251 bp overlap

OSR2 1 dataset

ChIP HEK293 GSE76494.OSR2.HEK293 156 bp overlap

PAX3 1 dataset

Motif DE_36h DE_36h-PAX3_MA1546.2 14 bp overlap

PAX6 1 dataset

ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 150 bp overlap

PDX1 3 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 180 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 183 bp overlap

ChIP islet ERP001456.PDX1.islet 167 bp overlap

PRDM9 1 dataset

Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap

PSIP1 1 dataset

ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 144 bp overlap

SMAD2 1 dataset

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 348 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 491 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 491 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 491 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 491 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 491 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 410 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 491 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 491 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 491 bp overlap

SOX10 1 dataset

Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap

SPIB 1 dataset

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

SUZ12 1 dataset

ChIP ProEs GSE59087.SUZ12.ProEs 124 bp overlap

TBX20 1 dataset

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

ZBTB24 1 dataset

ChIP HCT-116 GSE111683.ZBTB24.HCT-116 116 bp overlap

ZNF549 1 dataset

Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap

ZNF558 1 dataset

Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap

ZNF677 1 dataset

Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap

ZSCAN16 1 dataset

Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap

ZSCAN21 1 dataset

Motif DE_36h DE_36h-ZSCAN21_MA2336.1 7 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap