chr18 : 28,045,110 28,045,844
734 bp 55 TFs 0 linked genes
This 734 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:28,040,110 – 28,050,844
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 622 bp overlap
BRD4 3 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 134 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 580 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 277 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 191 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 305 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 288 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 383 bp overlap
CTCF 3 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 299 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 286 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 310 bp overlap
ERG 1 dataset
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 252 bp overlap
ESR1 7 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 130 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 291 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 325 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 208 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 432 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 288 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 252 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 620 bp overlap
FOXA1 2 datasets
ChIP A-549 ENCSR000BRD.FOXA1.A-549 133 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 117 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 734 bp overlap
ChIP DE DE-FOXA2-2 603 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 210 bp overlap
FOXL2 5 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 354 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 420 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 249 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 260 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 353 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 460 bp overlap
ChIP DE DE-GATA4-2 522 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 519 bp overlap
ChIP DE DE-GATA6-2 582 bp overlap
JUN 2 datasets
ChIP 786-O GSE86092.JUN.786-O 178 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 130 bp overlap
KLF9 2 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 95 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 122 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCFF064TDQ 459 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 421 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 342 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 441 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 186 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 223 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 292 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 377 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 331 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 151 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 381 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 237 bp overlap
ChIP SK-N-SH ENCFF965AKM 357 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 131 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 558 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 238 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 168 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 299 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 194 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 376 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 124 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 379 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 210 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 535 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 388 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 464 bp overlap
RBPJ 1 dataset
ChIP GIC GSE79734.RBPJ.GIC 272 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 134 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 215 bp overlap
REST 6 datasets
ChIP Ishikawa ENCFF456OHV 401 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 261 bp overlap
ChIP PFSK-1 ENCFF845VHA 321 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 162 bp overlap
ChIP SK-N-SH ENCFF635KBN 257 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 104 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 394 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 152 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 125 bp overlap
SMAD4 1 dataset
ChIP HGrC1_WT-TGF GSE138496.SMAD4.HGrC1_WT-TGF 175 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 433 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 144 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 213 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 302 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 275 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 359 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 555 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 257 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 451 bp overlap
USF1 1 dataset
ChIP Ishikawa ENCFF728IEG 261 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 260 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 225 bp overlap
ZNF675 1 dataset
ChIP HEK293T GSE78099.ZNF675.HEK293T 223 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 317 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 194 bp overlap