chr18 : 3,599,365 – 3,599,722
357 bp 54 TFs 2 linked genes
This 357 bp open chromatin element is linked to DLGAP1-AS1 and DLGAP1-AS2 and is bound by 54 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
DLGAP1-AS1 5.2 kb Proximal Proximity
DLGAP1-AS2 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:3,594,365 – 3,604,722
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 263 bp overlap
AR 23 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 197 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 206 bp overlap
ChIP LNCaP ERP003503.AR.LNCaP 157 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 244 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 268 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 133 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 142 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 198 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 261 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 357 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 201 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 313 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 282 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 346 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 196 bp overlap
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 207 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 259 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 143 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 199 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 126 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 155 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 228 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 177 bp overlap
BCL11A 6 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 52 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 65 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 76 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 93 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 79 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 91 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 237 bp overlap
BRD4 8 datasets
ChIP HCT-116 GSE73319.BRD4.HCT-116 184 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 239 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 173 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 184 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 348 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 185 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 321 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 204 bp overlap
CCAR2 1 dataset
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 156 bp overlap
CDX2 1 dataset
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 198 bp overlap
CTCF 4 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 246 bp overlap
ChIP HCT116 ENCFF003KHP 191 bp overlap
ChIP SK-N-SH ENCFF575DMG 179 bp overlap
ChIP endodermal cell ENCFF471YCZ 193 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 260 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 179 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 298 bp overlap
FOXA1 4 datasets
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 142 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 133 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 277 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 265 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 77 bp overlap
ChIP erythroblast ENCFF867JAR 168 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 262 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 51 bp overlap
ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 113 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 94 bp overlap
ChIP erythroid_Don002 GSE137982.GATA1.erythroid_Don002 51 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 96 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 254 bp overlap
GATA6 2 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 178 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 178 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 152 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 82 bp overlap
MAZ 2 datasets
ChIP K562 ENCFF809XHP 313 bp overlap
ChIP K562 ENCFF809XHP 301 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 280 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 74 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 169 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 328 bp overlap
NR5A2 1 dataset
ChIP A549 ENCFF834RVE 326 bp overlap
NRF1 9 datasets
ChIP HCC1954 GSE67867.NRF1.HCC1954 51 bp overlap
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 75 bp overlap
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 217 bp overlap
ChIP Hep-G2 GSE97661.NRF1.Hep-G2 87 bp overlap
ChIP Hep-G2 ENCSR853ADA.NRF1.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF694NVY 85 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 64 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 60 bp overlap
ChIP Namalwa GSE53133.NRF1.Namalwa 129 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 340 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 152 bp overlap
POLR2A 5 datasets
ChIP HCT116 ENCFF508RDJ 314 bp overlap
ChIP adrenal gland ENCFF843OBJ 357 bp overlap
ChIP adrenal gland ENCFF843OBJ 58 bp overlap
ChIP erythroblast ENCFF498VMR 357 bp overlap
ChIP erythroblast ENCFF498VMR 357 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 276 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 98 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 221 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 144 bp overlap
ChIP K562 ENCFF967GRF 328 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 103 bp overlap
ChIP HepG2 ENCFF561IAJ 85 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 357 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 357 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 118 bp overlap
SMAD4 2 datasets
ChIP HepG2 ENCFF615GTE 212 bp overlap
ChIP K562 ENCFF628RBP 139 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 192 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 211 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 199 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 214 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 290 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 326 bp overlap
SMARCC1 2 datasets
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 251 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 248 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 173 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 303 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 118 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 74 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 71 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 92 bp overlap
TBX5 8 datasets
ChIP G296S GSE85628.TBX5.G296S 285 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 285 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 294 bp overlap
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 196 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 196 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 328 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 262 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 200 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 124 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 256 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 176 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 253 bp overlap
ChIP K562 ENCFF427SDV 219 bp overlap
ZBTB4 3 datasets
ChIP HepG2 ENCFF828GZH 289 bp overlap
ChIP HepG2 ENCFF828GZH 329 bp overlap
ChIP HepG2 ENCFF828GZH 127 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 211 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 142 bp overlap
ZNF165 1 dataset
ChIP K562 ENCFF039BMN 336 bp overlap
ZNF215 1 dataset
ChIP K562 ENCFF317MOH 267 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 330 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 252 bp overlap
ZNF583 2 datasets
ChIP K562 ENCFF879KXH 261 bp overlap
ChIP K562 ENCFF879KXH 248 bp overlap
ZNF592 1 dataset
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 277 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 125 bp overlap
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