chr15 : 98,542,909 – 98,543,604

695 bp 101 TFs 1 linked gene

This 695 bp open chromatin element is linked to ENSG00000293388 and is bound by 101 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000293388		4.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

101 transcription factors

ALX3 1 dataset

Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap

AR 7 datasets

ChIP DU145_FOXA1 GSE47987.AR.DU145_FOXA1 181 bp overlap

ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 126 bp overlap

ChIP LNCaP_SHGATA2_R1881 GSE69043.AR.LNCaP_SHGATA2_R1881 167 bp overlap

ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 75 bp overlap

ChIP VCaP GSE148358.AR.VCaP 248 bp overlap

ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 463 bp overlap

ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 180 bp overlap

BAF155 1 dataset

ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 293 bp overlap

CBX8 1 dataset

ChIP A-549 ENCSR616MOB.CBX8.A-549 577 bp overlap

DMRTA1 1 dataset

Motif DE_36h DE_36h-DMRTA1_MA1707.2 10 bp overlap

DMRTA2 1 dataset

Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap

DRGX 1 dataset

Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap

Dlx2 1 dataset

Motif DE_36h DE_36h-Dlx2_MA0885.3 8 bp overlap

Dlx5 1 dataset

Motif DE_36h DE_36h-Dlx5_MA1476.3 8 bp overlap

EMX1 1 dataset

Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap

EMX2 1 dataset

Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap

EN1 1 dataset

Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap

EN2 1 dataset

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 384 bp overlap

ERG 1 dataset

ChIP VCaP GSE49091.ERG.VCaP 141 bp overlap

ESR1 1 dataset

ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 624 bp overlap

ESX1 1 dataset

Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 282 bp overlap

ETV5::HOXA2 1 dataset

Motif DE_36h DE_36h-ETV5HOXA2_MA1948.2 12 bp overlap

EVX1 1 dataset

Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap

EVX2 1 dataset

Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap

EZH2_phosphoT487 1 dataset

ChIP HCT-116 ENCSR429CLV.EZH2_phosphoT487.HCT-116 341 bp overlap

FOXA1 13 datasets

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 269 bp overlap

ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 320 bp overlap

ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 313 bp overlap

ChIP HEK293_r261g_TFS GSE123618.FOXA1.HEK293_r261g_TFS 420 bp overlap

ChIP LNCaP GSE64656.FOXA1.LNCaP 187 bp overlap

ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 364 bp overlap

ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 119 bp overlap

ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 239 bp overlap

ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 176 bp overlap

ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 100 bp overlap

ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 280 bp overlap

ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 250 bp overlap

ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 695 bp overlap

FOXA2 5 datasets

ChIP DE DE-FOXA2-1 564 bp overlap

ChIP DE DE-FOXA2-2 533 bp overlap

ChIP KerCT GSE90454.FOXA2.KerCT 259 bp overlap

ChIP PANC-1 GSE119930.FOXA2.PANC-1 316 bp overlap

ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 354 bp overlap

FOXC2 1 dataset

Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap

FOXD3 1 dataset

Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap

FOXE1 1 dataset

Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap

Foxq1 2 datasets

Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap

GATA2 3 datasets

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 140 bp overlap

ChIP VCaP GSE125236.GATA2.VCaP 203 bp overlap

ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 169 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 551 bp overlap

ChIP DE DE-GATA4-2 491 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 495 bp overlap

ChIP DE DE-GATA6-2 533 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 416 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 525 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 695 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 340 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 530 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 490 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 224 bp overlap

GBX1 1 dataset

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GSX1 1 dataset

Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap

GSX2 1 dataset

Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap

HOXA1 1 dataset

Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap

HOXA2 1 dataset

Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap

HOXA3 1 dataset

Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap

HOXA5 1 dataset

Motif DE_36h DE_36h-HOXA5_MA0158.2 8 bp overlap

HOXA6 1 dataset

Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap

HOXB1 1 dataset

Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap

HOXB2 1 dataset

Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap

HOXB3 1 dataset

Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap

HOXB5 1 dataset

Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap

HOXB6 1 dataset

Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap

HOXB7 1 dataset

Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap

HOXB8 1 dataset

Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap

HOXC8 1 dataset

Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap

HOXD3 1 dataset

Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap

HOXD8 1 dataset

Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap

ISX 1 dataset

Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap

LBX1 1 dataset

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LHX5 1 dataset

Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap

LHX6 1 dataset

Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap

LHX9 1 dataset

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

LMX1A 1 dataset

Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap

LMX1B 1 dataset

Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap

Lhx1 1 dataset

Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap

Lhx4 1 dataset

Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap

Lhx8 1 dataset

Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap

MEOX1 1 dataset

Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap

MEOX2 1 dataset

Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap

MIXL1 1 dataset

Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap

MNX1 1 dataset

Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap

MYC 1 dataset

ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 161 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 188 bp overlap

NKX6-2 1 dataset

Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap

NOTO 1 dataset

Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap

PAX4 1 dataset

Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap

PDX1 1 dataset

Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap

POU6F1 1 dataset

Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap

POU6F2 1 dataset

Motif DE_36h DE_36h-POU6F2_MA0793.2 9 bp overlap

PROP1 1 dataset

Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap

PRRX1 1 dataset

Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap

PRRX2 1 dataset

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

RAX2 1 dataset

Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap

RELA 1 dataset

ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.RELA.HeLa-B2_P65KD_TA_TNFA 100 bp overlap

RFX1 1 dataset

ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 275 bp overlap

RNF2 6 datasets

ChIP A-549 ENCSR798EGJ.RNF2.A-549 55 bp overlap

ChIP A-549 ENCSR798EGJ.RNF2.A-549 432 bp overlap

ChIP A549 ENCFF650XYA 183 bp overlap

ChIP A549 ENCFF650XYA 411 bp overlap

ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 371 bp overlap

ChIP fibroblast GSE139053.RNF2.fibroblast 519 bp overlap

RREB1 1 dataset

Motif DE_36h DE_36h-RREB1_MA0073.2 19 bp overlap

SHOX 1 dataset

Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap

SIX2 1 dataset

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 345 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 391 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 429 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 370 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 386 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 317 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 285 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap

SMARCC1 1 dataset

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 236 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 305 bp overlap

SPI1 1 dataset

ChIP EM-3 GSE128834.SPI1.EM-3 158 bp overlap

Shox2 1 dataset

Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 236 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap

TLX2 1 dataset

Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap

UNCX 1 dataset

Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap

VAX1 1 dataset

Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap

VAX2 1 dataset

Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap

VSX1 1 dataset

Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap

VSX2 1 dataset

Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap

ZEB2 1 dataset

ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 157 bp overlap

ZNF362 2 datasets

ChIP HEK293 ENCFF436CGE 214 bp overlap

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 119 bp overlap

ZNF384 1 dataset

ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 156 bp overlap