chr15 : 79,635,975 79,636,613
638 bp 68 TFs 0 linked genes
This 638 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:79,630,975 – 79,641,613
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 140 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 209 bp overlap
BRD4 1 dataset
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 573 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 473 bp overlap
CTCF 5 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 371 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 331 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 394 bp overlap
EP300 7 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 379 bp overlap
ChIP A549 ENCFF476KCM 395 bp overlap
ChIP A549 ENCFF476KCM 194 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 183 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 388 bp overlap
ChIP neural cell ENCFF442QNK 360 bp overlap
ChIP neural cell ENCFF442QNK 517 bp overlap
FOS 2 datasets
ChIP MCF-7 ENCFF282FWZ 421 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 284 bp overlap
FOSL2 9 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 147 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 393 bp overlap
ChIP A-549 ENCSR448TVS.FOSL2.A-549 294 bp overlap
ChIP A549 ENCFF195CES 365 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 164 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 194 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 376 bp overlap
ChIP SK-N-SH ENCFF127ZDW 285 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 259 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 290 bp overlap
ChIP DE DE-FOXA2-2 264 bp overlap
FOXS1 3 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif DE_24h DE_24h-FOXS1_MA2118.1 8 bp overlap
Motif DE_36h DE_36h-FOXS1_MA2118.1 8 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 147 bp overlap
ChIP SK-N-SH ENCFF040SSB 356 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 373 bp overlap
ChIP DE DE-GATA4-2 487 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 396 bp overlap
ChIP DE DE-GATA6-2 443 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 556 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 638 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 565 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 638 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 565 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 331 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 112 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 638 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 562 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 638 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 638 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 357 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 638 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 388 bp overlap
JUND 3 datasets
ChIP SK-N-SH ENCFF551NEQ 321 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 247 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 173 bp overlap
MAX 3 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 250 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 243 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 123 bp overlap
MED1 2 datasets
ChIP A-549 GSE76893.MED1.A-549 455 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 358 bp overlap
MEIS1 3 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MITF 1 dataset
ChIP 501-mel GSE61965.MITF.501-mel 253 bp overlap
MYC 1 dataset
ChIP NCI-H128 GSE41105.MYC.NCI-H128 117 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 432 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 364 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 357 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 242 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 226 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 199 bp overlap
NR4A1 3 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif DE_24h DE_24h-NR4A1_MA1112.3 8 bp overlap
Motif DE_36h DE_36h-NR4A1_MA1112.3 8 bp overlap
NR4A2 3 datasets
Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap
Motif DE_24h DE_24h-NR4A2_MA0160.3 8 bp overlap
Motif DE_36h DE_36h-NR4A2_MA0160.3 8 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 91 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 110 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 371 bp overlap
Rfx6 3 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif DE_24h DE_24h-Rfx6_MA1724.2 9 bp overlap
Motif DE_36h DE_36h-Rfx6_MA1724.2 9 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 403 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 369 bp overlap
SMAD2-3 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 241 bp overlap
ChIP HGrC1_EV-TGF GSE138496.SMAD2-3.HGrC1_EV-TGF 185 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 638 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 638 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 638 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 638 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 638 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 638 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 638 bp overlap
SMAD3 5 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 145 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 287 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 304 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 585 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 186 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 127 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 290 bp overlap
SMARCA4 12 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 85 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 403 bp overlap
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 441 bp overlap
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 61 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 102 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 72 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 130 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 80 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 131 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 117 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 141 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 436 bp overlap
SMARCC1 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 356 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 402 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 51 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 310 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 180 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 147 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 347 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 323 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 455 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 529 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_L169A GSE139053.SS18-SSX.fibroblast_L169A 293 bp overlap
STAT1 3 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif DE_24h DE_24h-STAT1_MA0137.4 9 bp overlap
Motif DE_36h DE_36h-STAT1_MA0137.4 9 bp overlap
STAT3 3 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif DE_24h DE_24h-STAT3_MA0144.3 9 bp overlap
Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap
Spi1 3 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Stat4 3 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif DE_24h DE_24h-Stat4_MA0518.2 10 bp overlap
Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 259 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 266 bp overlap
TBX19 3 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap
TBXT 2 datasets
Motif DE_12h DE_12h-TBXT_MA0009.2 16 bp overlap
Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap
TCF12 2 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 532 bp overlap
ChIP SK-N-SH ENCFF147AHB 131 bp overlap
TP53 1 dataset
ChIP H9 GSE142050.TP53.H9 423 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 496 bp overlap
ZIC1 3 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
ZIC4 3 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
ZNF382 1 dataset
Motif DE_36h DE_36h-ZNF382_MA1594.1 24 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Zic1::Zic2 3 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 3 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap