chr15 : 57,035,689 – 57,036,132
443 bp 63 TFs 0 linked genes
This 443 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:57,030,689 – 57,041,132
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
Atf3 3 datasets
Motif DE_36h DE_36h-Atf3_MA1988.2 7 bp overlap
Motif DE_48h DE_48h-Atf3_MA1988.2 7 bp overlap
Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap
BATF 3 datasets
Motif DE_36h DE_36h-BATF_MA1634.2 7 bp overlap
Motif DE_48h DE_48h-BATF_MA1634.2 7 bp overlap
Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap
BATF3 3 datasets
Motif DE_36h DE_36h-BATF3_MA0835.3 7 bp overlap
Motif DE_48h DE_48h-BATF3_MA0835.3 7 bp overlap
Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 3 datasets
Motif DE_36h DE_36h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_48h DE_48h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap
BNC2 3 datasets
Motif DE_36h DE_36h-BNC2_MA1928.2 7 bp overlap
Motif DE_48h DE_48h-BNC2_MA1928.2 7 bp overlap
Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 130 bp overlap
EBF1 2 datasets
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
ELF1 3 datasets
Motif DE_36h DE_36h-ELF1_MA0473.4 9 bp overlap
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap
ELF3 3 datasets
Motif DE_36h DE_36h-ELF3_MA0640.3 9 bp overlap
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 166 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 173 bp overlap
Ebf4 2 datasets
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
FOXA1 2 datasets
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 91 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 206 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 443 bp overlap
ChIP DE DE-FOXA2-2 439 bp overlap
FOXC2 3 datasets
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD3 3 datasets
Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
Foxj3 3 datasets
Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap
Motif DE_48h DE_48h-Foxj3_MA0851.2 9 bp overlap
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxq1 3 datasets
Motif DE_36h DE_36h-Foxq1_MA0040.2 10 bp overlap
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 377 bp overlap
ChIP DE DE-GATA4-2 443 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 340 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 409 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 345 bp overlap
ChIP DE DE-GATA6-2 443 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 390 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 443 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 443 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 443 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 443 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 443 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 389 bp overlap
ChIP foregut GSE117136.GATA6.foregut 443 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 289 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 299 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 424 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 181 bp overlap
Jun 3 datasets
Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap
Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap
Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 226 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 254 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 260 bp overlap
MAFK 3 datasets
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap
MSANTD3 3 datasets
Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_48h DE_48h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 397 bp overlap
NANOG 2 datasets
ChIP WA01 ERP004238.NANOG.WA01 263 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 329 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 154 bp overlap
NFIL3 1 dataset
Motif DE_36h DE_36h-NFIL3_MA0025.3 9 bp overlap
NKX2-2 3 datasets
Motif DE_36h DE_36h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_48h DE_48h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap
PBX3 3 datasets
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PKNOX1 7 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
ChIP HEK293T ENCFF174WDB 196 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 127 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 281 bp overlap
ChIP K562 ENCFF236IUS 284 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 443 bp overlap
ChIP HepG2 ENCFF561IAJ 443 bp overlap
RBPJ 3 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REL 3 datasets
Motif DE_36h DE_36h-REL_MA0101.1 10 bp overlap
Motif DE_48h DE_48h-REL_MA0101.1 10 bp overlap
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
RELA 3 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
Motif DE_48h DE_48h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
RORA 1 dataset
Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 410 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 341 bp overlap
SMARCA4 1 dataset
ChIP hiPSC GSE124903.SMARCA4.hiPSC 261 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 277 bp overlap
SMARCC1 1 dataset
ChIP hiPSC GSE124903.SMARCC1.hiPSC 192 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 268 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 440 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 254 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 114 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 285 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 99 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 182 bp overlap
ZIC1 3 datasets
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 3 datasets
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_48h DE_48h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 3 datasets
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_48h DE_48h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZKSCAN5 5 datasets
Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 128 bp overlap
ChIP HepG2 ENCFF579HCQ 385 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 83 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 57 bp overlap
ZNF354C 1 dataset
Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap
ZNF75D 3 datasets
Motif DE_36h DE_36h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_48h DE_48h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 80 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 343 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 443 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zic2 3 datasets
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
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