chr1 : 223,319,987 223,320,137
150 bp 44 TFs 0 linked genes
This 150 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:223,314,987 – 223,325,137
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 150 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 55 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 82 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 150 bp overlap
ChIP H1 ENCFF399KAM 150 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 150 bp overlap
ATF2 1 dataset
ChIP H1 ENCFF295GZO 150 bp overlap
BRD4 3 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 150 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 150 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 150 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 142 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 150 bp overlap
EGR1 1 dataset
ChIP Ishikawa ENCFF550FKT 150 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 150 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 150 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 150 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 58 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 150 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 150 bp overlap
ChIP DE DE-FOXA2-2 65 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 150 bp overlap
ChIP DE DE-GATA4-2 150 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 150 bp overlap
ChIP DE DE-GATA6-2 150 bp overlap
GRHL2 1 dataset
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 86 bp overlap
Hic1 1 dataset
Motif DE_72h DE_72h-Hic1_MA0739.2 8 bp overlap
JUN 1 dataset
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 150 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 79 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 150 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 150 bp overlap
ChIP Ishikawa ENCFF064TDQ 150 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 108 bp overlap
MED1 1 dataset
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 95 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 150 bp overlap
NFIB 1 dataset
Motif DE_72h DE_72h-NFIB_MA1643.2 17 bp overlap
NFIC 3 datasets
Motif DE_72h DE_72h-NFIC_MA1527.2 15 bp overlap
ChIP Ishikawa ENCFF029AAD 135 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 150 bp overlap
NFIX 1 dataset
Motif DE_72h DE_72h-NFIX_MA1528.2 14 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 150 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 150 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 150 bp overlap
RELA 1 dataset
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 104 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 150 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 150 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 146 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 150 bp overlap
SOX2 5 datasets
ChIP H9 GSE46837.SOX2.H9 118 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 150 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 108 bp overlap
ChIP hESC GSE18292.SOX2.hESC 65 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 150 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 150 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 104 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 144 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 150 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 150 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 150 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 131 bp overlap
YY1 2 datasets
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 149 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 109 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap