chr1 : 223,224,568 223,224,762
194 bp 52 TFs 0 linked genes
This 194 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:223,219,568 – 223,229,762
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 101 bp overlap
BHLHE40 2 datasets
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 129 bp overlap
ChIP K562 ENCFF923NJI 194 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 194 bp overlap
CBFB 1 dataset
ChIP K562 ENCFF145YWG 194 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 124 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 108 bp overlap
CTCF 19 datasets
ChIP GM23338 ENCFF772DML 182 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 194 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 194 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 189 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 130 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 180 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 194 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 140 bp overlap
ChIP K562 ENCFF082GOI 183 bp overlap
ChIP K562 ENCFF111MGE 188 bp overlap
ChIP K562 ENCFF400DFR 194 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 155 bp overlap
ChIP MCF-7 ENCFF844STM 181 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 121 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 157 bp overlap
ChIP endodermal cell ENCFF471YCZ 194 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 160 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 180 bp overlap
ChIP placenta ENCFF029PHY 194 bp overlap
CTCFL 1 dataset
ChIP K-562 ENCSR000BNK.CTCFL.K-562 156 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 132 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 120 bp overlap
E2F6 6 datasets
ChIP H1 ENCFF785DWK 194 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 194 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 194 bp overlap
ChIP K562 ENCFF136LTS 194 bp overlap
ChIP K562 ENCFF163WMT 194 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 194 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 141 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 194 bp overlap
FOXP1 1 dataset
ChIP K562 ENCFF954SDY 194 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 194 bp overlap
ChIP K562 ENCFF320EQC 152 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 181 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 175 bp overlap
ChIP K562 ENCFF110LJS 194 bp overlap
ChIP K562 ENCFF398VJM 158 bp overlap
ChIP K562 ENCFF524IJO 194 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 106 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 194 bp overlap
ChIP K562 ENCFF140CEX 194 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 58 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 194 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 194 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 128 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 194 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 157 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 74 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 194 bp overlap
ChIP liver ENCFF522JHE 194 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 194 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 172 bp overlap
ChIP K562 ENCFF196WTG 194 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 164 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 154 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 194 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR138FUZ.RNF2.K-562 165 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 189 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 190 bp overlap
ChIP K562 ENCFF316MCJ 194 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 194 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 169 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 143 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 179 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 129 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF584VSB 194 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 171 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 108 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 194 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 170 bp overlap
ChIP K562 ENCFF633EZB 194 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 194 bp overlap
USF2 3 datasets
ChIP K-562 ENCSR578KEN.USF2.K-562 120 bp overlap
ChIP K562 ENCFF397QGU 194 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 120 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 194 bp overlap
ZBTB33 5 datasets
ChIP HepG2 ENCFF778UKV 175 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 194 bp overlap
ChIP K562 ENCFF427SDV 194 bp overlap
ChIP K562 ENCFF875HLX 194 bp overlap
ChIP K562 ENCFF911VPU 120 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 113 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 194 bp overlap
ZNF124 1 dataset
ChIP K562 ENCFF960RTU 194 bp overlap
ZNF18 1 dataset
ChIP K-562 GSE97661.ZNF18.K-562 194 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 171 bp overlap
ZNF431 1 dataset
ChIP K562 ENCFF431VZH 194 bp overlap