chr12 : 119,258,485 119,259,071
586 bp 51 TFs 1 linked gene
This 586 bp open chromatin element is linked to ENSG00000256311 and is bound by 51 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000256311 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:119,253,485 – 119,264,071
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
AR 1 dataset
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 160 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 255 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 287 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 429 bp overlap
ATF4 2 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 77 bp overlap
ChIP K-562 ENCSR145TSJ.ATF4.K-562 146 bp overlap
ATF7 1 dataset
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 125 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 211 bp overlap
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 492 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 358 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 406 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 519 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap
CEBPG 2 datasets
ChIP K-562 ENCSR490LWA.CEBPG.K-562 136 bp overlap
ChIP K562 ENCFF956TPS 255 bp overlap
CTCF 1 dataset
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 185 bp overlap
Cebpa 17 datasets
ChIP BLaER1 ENCFF031ISE 175 bp overlap
ChIP BLaER1 ENCFF093OYK 209 bp overlap
ChIP BLaER1 ENCFF140EYR 169 bp overlap
ChIP BLaER1 ENCFF250ODG 97 bp overlap
ChIP BLaER1 ENCFF274GAT 203 bp overlap
ChIP BLaER1 ENCFF335XTP 108 bp overlap
ChIP BLaER1 ENCFF341QPD 169 bp overlap
ChIP BLaER1 ENCFF346MCV 109 bp overlap
ChIP BLaER1 ENCFF364PUR 177 bp overlap
ChIP BLaER1 ENCFF374ODN 216 bp overlap
ChIP BLaER1 ENCFF460KDD 158 bp overlap
ChIP BLaER1 ENCFF508JZF 144 bp overlap
ChIP BLaER1 ENCFF798NMV 169 bp overlap
ChIP BLaER1 ENCFF844FIP 173 bp overlap
ChIP BLaER1 ENCFF858JKM 76 bp overlap
ChIP BLaER1 ENCFF896HSY 194 bp overlap
ChIP BLaER1 ENCFF952XLX 182 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 297 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 148 bp overlap
ChIP neural cell ENCFF442QNK 54 bp overlap
ERG 2 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 76 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 59 bp overlap
ESR1 1 dataset
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 57 bp overlap
EZH2 4 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 270 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 222 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 349 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 104 bp overlap
FOXA1 1 dataset
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 306 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 391 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 376 bp overlap
ChIP DE DE-GATA4-2 420 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 415 bp overlap
ChIP DE DE-GATA6-2 335 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 332 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 463 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 406 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 123 bp overlap
IKZF1 1 dataset
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 130 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 283 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 56 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 281 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 234 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 195 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 240 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 182 bp overlap
NR2F2 1 dataset
ChIP liver ENCFF565JGD 58 bp overlap
NR3C1 1 dataset
ChIP NALM-6_CASP1 GSE67046.NR3C1.NALM-6_CASP1 55 bp overlap
PAX5 2 datasets
ChIP NALM-6 GSE126300.PAX5.NALM-6 319 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 165 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 415 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 152 bp overlap
POLR2A 3 datasets
ChIP esophagus muscularis mucosa ENCFF791ZXN 103 bp overlap
ChIP neural cell ENCFF604SPB 86 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 50 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 246 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 107 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 252 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 173 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 462 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 586 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 370 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 293 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 586 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 284 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 586 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 552 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 181 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 237 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 269 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 290 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 573 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 210 bp overlap
TCF12 1 dataset
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 53 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 460 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 159 bp overlap